Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.38□□□□□ -0.43
VGLL1Q99990 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VGLL1Q99990 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.38□□□□□ -0.43
VGLL1Q99990 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC129492.6-201ENST00000611383 1305 ntBASIC12.37□□□□□ -0.43
VGLL1Q99990 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC069224.1-201ENST00000566372 1715 ntBASIC12.37□□□□□ -0.43
VGLL1Q99990 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC005622.1-201ENST00000636801 1703 ntBASIC12.37□□□□□ -0.43
VGLL1Q99990 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 HCG4-201ENST00000418983 998 ntBASIC12.37□□□□□ -0.43
VGLL1Q99990 LAGE3P1-201ENST00000425356 484 ntBASIC12.37□□□□□ -0.43
VGLL1Q99990 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.37□□□□□ -0.43
VGLL1Q99990 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
VGLL1Q99990 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.37□□□□□ -0.43
VGLL1Q99990 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC091304.2-201ENST00000564639 760 ntBASIC12.37□□□□□ -0.43
VGLL1Q99990 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.37□□□□□ -0.43
VGLL1Q99990 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
VGLL1Q99990 GGTLC5P-201ENST00000617623 998 ntBASIC12.37□□□□□ -0.43
VGLL1Q99990 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
VGLL1Q99990 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC067930.6-201ENST00000623257 4947 ntBASIC12.37□□□□□ -0.43
VGLL1Q99990 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.37□□□□□ -0.43
VGLL1Q99990 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.37□□□□□ -0.43
VGLL1Q99990 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.37□□□□□ -0.43
VGLL1Q99990 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.37□□□□□ -0.43
VGLL1Q99990 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
VGLL1Q99990 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VGLL1Q99990 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
VGLL1Q99990 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
VGLL1Q99990 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.36□□□□□ -0.43
VGLL1Q99990 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.36□□□□□ -0.43
VGLL1Q99990 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 HCG4P8-203ENST00000443049 980 ntBASIC12.36□□□□□ -0.43
VGLL1Q99990 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms