Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 AC144831.1-201ENST00000573312 2656 ntBASIC14.42□□□□□ -0.1
VRK1Q99986 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
VRK1Q99986 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 EGFEM1P-202ENST00000431685 1563 ntBASIC14.42□□□□□ -0.1
VRK1Q99986 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.42□□□□□ -0.1
VRK1Q99986 AC092384.3-202ENST00000564646 2873 ntBASIC14.42□□□□□ -0.1
VRK1Q99986 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.42□□□□□ -0.1
VRK1Q99986 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.41□□□□□ -0.1
VRK1Q99986 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK1Q99986 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.41□□□□□ -0.1
VRK1Q99986 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 AC002056.1-201ENST00000395613 760 ntBASIC14.41□□□□□ -0.1
VRK1Q99986 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VRK1Q99986 AC107918.2-201ENST00000530817 355 ntBASIC14.41□□□□□ -0.1
VRK1Q99986 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK1Q99986 AP002472.1-201ENST00000577490 586 ntBASIC14.41□□□□□ -0.1
VRK1Q99986 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK1Q99986 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.41□□□□□ -0.1
VRK1Q99986 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.41□□□□□ -0.1
VRK1Q99986 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK1Q99986 AC092902.6-201ENST00000641783 218 ntBASIC14.41□□□□□ -0.1
VRK1Q99986 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 AC092364.2-201ENST00000596710 2692 ntBASIC14.41□□□□□ -0.1
VRK1Q99986 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.41□□□□□ -0.1
VRK1Q99986 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK1Q99986 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VRK1Q99986 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.41□□□□□ -0.1
VRK1Q99986 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.41□□□□□ -0.1
VRK1Q99986 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.41□□□□□ -0.1
VRK1Q99986 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VRK1Q99986 LINC02228-204ENST00000642115 2962 ntBASIC14.4□□□□□ -0.1
VRK1Q99986 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.4□□□□□ -0.1
VRK1Q99986 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
VRK1Q99986 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
VRK1Q99986 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.4□□□□□ -0.1
VRK1Q99986 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK1Q99986 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK1Q99986 AC005412.3-201ENST00000580309 715 ntBASIC14.4□□□□□ -0.1
VRK1Q99986 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.4□□□□□ -0.1
VRK1Q99986 MIR4515-201ENST00000584082 81 ntBASIC14.4□□□□□ -0.1
VRK1Q99986 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.4□□□□□ -0.1
VRK1Q99986 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.4□□□□□ -0.1
VRK1Q99986 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.4□□□□□ -0.1
VRK1Q99986 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK1Q99986 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.4□□□□□ -0.1
VRK1Q99986 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VRK1Q99986 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VRK1Q99986 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VRK1Q99986 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK1Q99986 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VRK1Q99986 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.4□□□□□ -0.1
VRK1Q99986 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms