Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 AC079328.2-201ENST00000561241 3354 ntBASIC16.79■□□□□ 0.28
HAPLN3Q96S86 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HAPLN3Q96S86 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 AL353705.2-201ENST00000428243 662 ntBASIC16.78■□□□□ 0.28
HAPLN3Q96S86 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 AC004449.1-201ENST00000564240 433 ntBASIC16.78■□□□□ 0.28
HAPLN3Q96S86 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HAPLN3Q96S86 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.77■□□□□ 0.28
HAPLN3Q96S86 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 AC015911.4-201ENST00000588022 1070 ntBASIC16.77■□□□□ 0.28
HAPLN3Q96S86 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 AC007967.4-201ENST00000614700 386 ntBASIC16.77■□□□□ 0.28
HAPLN3Q96S86 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HAPLN3Q96S86 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.77■□□□□ 0.27
HAPLN3Q96S86 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.77■□□□□ 0.27
HAPLN3Q96S86 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms