Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 AC087163.2-201ENST00000457299 853 ntBASIC13.22□□□□□ -0.29
RAB40CQ96S21 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RAB40CQ96S21 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RAB40CQ96S21 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.21□□□□□ -0.29
RAB40CQ96S21 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 PMS2P1-201ENST00000431037 1228 ntBASIC13.21□□□□□ -0.29
RAB40CQ96S21 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 AL139424.1-201ENST00000607572 797 ntBASIC13.21□□□□□ -0.29
RAB40CQ96S21 AC069148.1-201ENST00000608741 768 ntBASIC13.21□□□□□ -0.29
RAB40CQ96S21 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.21□□□□□ -0.29
RAB40CQ96S21 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAB40CQ96S21 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RAB40CQ96S21 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 SLC22A20-204ENST00000530038 1673 ntBASIC13.21□□□□□ -0.3
RAB40CQ96S21 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RAB40CQ96S21 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.21□□□□□ -0.3
RAB40CQ96S21 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAB40CQ96S21 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 AC008677.1-201ENST00000519230 1561 ntBASIC13.2□□□□□ -0.3
RAB40CQ96S21 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.2□□□□□ -0.3
RAB40CQ96S21 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAB40CQ96S21 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms