Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AP006547.1-201ENST00000563435 692 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AC021097.1-201ENST00000607902 574 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AL096828.3-201ENST00000615354 462 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AC244452.3-201ENST00000636814 210 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 NDUFV2P1-201ENST00000596415 907 ntBASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.6□□□□□ -0.23
CSMD1Q96PZ7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC132872.4-202ENST00000622924 2756 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC084018.2-201ENST00000613093 2607 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AL645728.1-201ENST00000366221 2101 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 INTS4P2-202ENST00000614726 2019 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC134698.3-201ENST00000523880 214 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC104982.3-201ENST00000581995 514 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC011491.1-203ENST00000637688 543 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC093525.9-201ENST00000624961 1746 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 AC005702.4-201ENST00000618393 416 ntBASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CSMD1Q96PZ7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 EEF1DP1-201ENST00000585891 896 ntBASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 AC079336.7-201ENST00000623428 1078 ntBASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CSMD1Q96PZ7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 AC091812.3-201ENST00000621362 345 ntBASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms