Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNGAP1Q96PV0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNGAP1Q96PV0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNGAP1Q96PV0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNGAP1Q96PV0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNGAP1Q96PV0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.37■□□□□ 0.53
SYNGAP1Q96PV0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 GGT3P-204ENST00000453783 1664 ntBASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 AC023310.3-201ENST00000557027 670 ntBASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 AC100756.1-201ENST00000562736 682 ntBASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 AC138749.3-201ENST00000567691 622 ntBASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 AC017083.2-201ENST00000608069 979 ntBASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 AC116165.1-201ENST00000611806 668 ntBASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SYNGAP1Q96PV0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 ACA64.2-201ENST00000459014 129 ntBASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 AGGF1P2-201ENST00000426656 2106 ntBASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 PCGF3-213ENST00000620529 1899 ntBASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SYNGAP1Q96PV0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 TNRC18P3-201ENST00000441896 2691 ntBASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.34■□□□□ 0.53
SYNGAP1Q96PV0 MYCLP2-201ENST00000449268 967 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms