Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 FO393414.2-201ENST00000405153 598 ntBASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 AC011467.4-201ENST00000594891 528 ntBASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 AJ011932.1-201ENST00000621707 465 ntBASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
ECHDC3Q96DC8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ECHDC3Q96DC8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ECHDC3Q96DC8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.14■□□□□ 0.18
ECHDC3Q96DC8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 KRT8P37-201ENST00000451609 1420 ntBASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 SERBP1P3-201ENST00000459980 809 ntBASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AL512361.1-201ENST00000554200 418 ntBASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AC010336.2-201ENST00000564226 506 ntBASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AC134407.2-201ENST00000625089 1978 ntBASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ECHDC3Q96DC8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms