Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 KLF2P3-201ENST00000451977 1087 ntBASIC14.38□□□□□ -0.11
APH1AQ96BI3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 AC061975.2-201ENST00000581722 295 ntBASIC14.38□□□□□ -0.11
APH1AQ96BI3 MIR4321-201ENST00000592276 80 ntBASIC14.38□□□□□ -0.11
APH1AQ96BI3 AC007967.4-201ENST00000614700 386 ntBASIC14.38□□□□□ -0.11
APH1AQ96BI3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APH1AQ96BI3 AC006449.6-201ENST00000612330 2296 ntBASIC14.38□□□□□ -0.11
APH1AQ96BI3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
APH1AQ96BI3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AC084018.2-201ENST00000613093 2607 ntBASIC14.37□□□□□ -0.11
APH1AQ96BI3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AC107890.1-201ENST00000422478 521 ntBASIC14.37□□□□□ -0.11
APH1AQ96BI3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 RFPL4AP1-201ENST00000530883 850 ntBASIC14.37□□□□□ -0.11
APH1AQ96BI3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AL391005.1-201ENST00000623953 2435 ntBASIC14.37□□□□□ -0.11
APH1AQ96BI3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APH1AQ96BI3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.37□□□□□ -0.11
APH1AQ96BI3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms