Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 C1QBPP1-201ENST00000400117 770 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 HSPB1P2-201ENST00000448722 546 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.91□□□□□ -0.18
USP9XQ93008 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.91□□□□□ -0.18
USP9XQ93008 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.91□□□□□ -0.18
USP9XQ93008 AP000346.4-201ENST00000614827 381 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 YRDCP1-201ENST00000621419 643 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.91□□□□□ -0.18
USP9XQ93008 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
USP9XQ93008 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.91□□□□□ -0.18
USP9XQ93008 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.91□□□□□ -0.18
USP9XQ93008 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
USP9XQ93008 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
USP9XQ93008 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 ACKR1-201ENST00000368121 1240 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.91□□□□□ -0.18
USP9XQ93008 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.91□□□□□ -0.18
USP9XQ93008 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 AC138649.2-201ENST00000615886 705 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 AC145423.3-201ENST00000615987 467 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.91□□□□□ -0.18
USP9XQ93008 AL139011.1-202ENST00000642063 584 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 AC106820.2-201ENST00000563775 3264 ntBASIC13.91□□□□□ -0.18
USP9XQ93008 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.91□□□□□ -0.18
USP9XQ93008 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
USP9XQ93008 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
USP9XQ93008 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.9□□□□□ -0.18
USP9XQ93008 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 AL645728.1-201ENST00000366221 2101 ntBASIC13.9□□□□□ -0.18
USP9XQ93008 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC13.9□□□□□ -0.18
USP9XQ93008 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 AC026410.3-201ENST00000514280 936 ntBASIC13.9□□□□□ -0.18
USP9XQ93008 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.9□□□□□ -0.18
USP9XQ93008 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.9□□□□□ -0.18
USP9XQ93008 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.9□□□□□ -0.18
USP9XQ93008 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
USP9XQ93008 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
USP9XQ93008 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.9□□□□□ -0.18
USP9XQ93008 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.9□□□□□ -0.18
USP9XQ93008 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.9□□□□□ -0.18
USP9XQ93008 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.9□□□□□ -0.18
USP9XQ93008 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.9□□□□□ -0.18
USP9XQ93008 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.9□□□□□ -0.18
USP9XQ93008 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
USP9XQ93008 AL353726.2-201ENST00000623259 884 ntBASIC13.9□□□□□ -0.18
USP9XQ93008 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.9□□□□□ -0.18
USP9XQ93008 DRD5P1-201ENST00000456605 1438 ntBASIC13.9□□□□□ -0.18
USP9XQ93008 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.9□□□□□ -0.18
USP9XQ93008 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
USP9XQ93008 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.9□□□□□ -0.19
USP9XQ93008 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
USP9XQ93008 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
USP9XQ93008 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.89□□□□□ -0.19
USP9XQ93008 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.89□□□□□ -0.19
USP9XQ93008 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms