Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRQ92834 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RPGRQ92834 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RPGRQ92834 TARDBPP1-201ENST00000442013 1203 ntBASIC19.81■□□□□ 0.76
RPGRQ92834 AC245100.5-201ENST00000452108 331 ntBASIC19.81■□□□□ 0.76
RPGRQ92834 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RPGRQ92834 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.81■□□□□ 0.76
RPGRQ92834 AL359711.2-201ENST00000563105 872 ntBASIC19.81■□□□□ 0.76
RPGRQ92834 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRQ92834 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 AC105020.1-201ENST00000435356 2205 ntBASIC19.81■□□□□ 0.76
RPGRQ92834 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRQ92834 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.81■□□□□ 0.76
RPGRQ92834 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RPGRQ92834 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RPGRQ92834 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.81■□□□□ 0.76
RPGRQ92834 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRQ92834 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.8■□□□□ 0.76
RPGRQ92834 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 AC093525.8-201ENST00000624099 1342 ntBASIC19.8■□□□□ 0.76
RPGRQ92834 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPGRQ92834 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
RPGRQ92834 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 ACTBP11-201ENST00000436287 1126 ntBASIC19.8■□□□□ 0.76
RPGRQ92834 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.8■□□□□ 0.76
RPGRQ92834 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.8■□□□□ 0.76
RPGRQ92834 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.8■□□□□ 0.76
RPGRQ92834 BRI3BPP1-201ENST00000594224 787 ntBASIC19.8■□□□□ 0.76
RPGRQ92834 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RPGRQ92834 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
RPGRQ92834 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RPGRQ92834 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RPGRQ92834 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
RPGRQ92834 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.8■□□□□ 0.76
RPGRQ92834 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.8■□□□□ 0.76
RPGRQ92834 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.8■□□□□ 0.76
RPGRQ92834 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRQ92834 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.8■□□□□ 0.76
RPGRQ92834 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RPGRQ92834 HLA-A-202ENST00000376806 1854 ntBASIC19.79■□□□□ 0.76
RPGRQ92834 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.79■□□□□ 0.76
RPGRQ92834 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
RPGRQ92834 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RPGRQ92834 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.79■□□□□ 0.76
RPGRQ92834 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 AC074338.1-201ENST00000416825 156 ntBASIC19.79■□□□□ 0.76
RPGRQ92834 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RPGRQ92834 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.79■□□□□ 0.76
RPGRQ92834 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RPGRQ92834 BCRP2-202ENST00000447763 634 ntBASIC19.79■□□□□ 0.76
RPGRQ92834 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 BCRP6-201ENST00000510112 632 ntBASIC19.79■□□□□ 0.76
RPGRQ92834 BCRP7-201ENST00000511549 544 ntBASIC19.79■□□□□ 0.76
RPGRQ92834 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.79■□□□□ 0.76
RPGRQ92834 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.79■□□□□ 0.76
RPGRQ92834 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
RPGRQ92834 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.79■□□□□ 0.76
RPGRQ92834 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPGRQ92834 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPGRQ92834 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPGRQ92834 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.79■□□□□ 0.76
RPGRQ92834 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRQ92834 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPGRQ92834 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPGRQ92834 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms