Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 AC004817.3-201ENST00000602957 2129 ntBASIC15.86■□□□□ 0.13
HIPK4Q8NE63 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.86■□□□□ 0.13
HIPK4Q8NE63 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HIPK4Q8NE63 SSR4P1-203ENST00000599569 2260 ntBASIC15.85■□□□□ 0.13
HIPK4Q8NE63 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 KRT8P49-201ENST00000604166 1432 ntBASIC15.85■□□□□ 0.13
HIPK4Q8NE63 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 LINC00982-205ENST00000420957 435 ntBASIC15.85■□□□□ 0.13
HIPK4Q8NE63 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 AC104819.1-201ENST00000504587 486 ntBASIC15.85■□□□□ 0.13
HIPK4Q8NE63 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 AC092329.2-201ENST00000598402 547 ntBASIC15.85■□□□□ 0.13
HIPK4Q8NE63 AC073592.4-201ENST00000623827 446 ntBASIC15.85■□□□□ 0.13
HIPK4Q8NE63 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 IER3-202ENST00000376377 1350 ntBASIC15.85■□□□□ 0.13
HIPK4Q8NE63 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIPK4Q8NE63 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 ABCD1P5-201ENST00000445663 754 ntBASIC15.84■□□□□ 0.13
HIPK4Q8NE63 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AL139011.1-202ENST00000642063 584 ntBASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AC007686.3-201ENST00000619017 3487 ntBASIC15.84■□□□□ 0.13
HIPK4Q8NE63 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIPK4Q8NE63 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms