Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TREML5P-201ENST00000421694 576 ntBASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 IGHV3-42-201ENST00000520410 361 ntBASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 KRT8P23-201ENST00000560090 1207 ntBASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC33Q8N5R6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 WASH6P-202ENST00000359512 1437 ntBASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 PCGF3-213ENST00000620529 1899 ntBASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 SPDYE14P-201ENST00000442619 822 ntBASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 PAUPAR-201ENST00000630360 2965 ntBASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 FER1L4-210ENST00000615531 5998 ntBASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.06■□□□□ 0.32
CCDC33Q8N5R6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 AC236430.1-201ENST00000402231 743 ntBASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 AC109635.5-201ENST00000533593 962 ntBASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 MIR6080-201ENST00000617359 66 ntBASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 AL390754.1-201ENST00000619088 582 ntBASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC33Q8N5R6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms