Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 NME2P1-201ENST00000426182 414 ntBASIC16.5■□□□□ 0.23
CHPFQ8IZ52 AL353779.1-201ENST00000434793 351 ntBASIC16.5■□□□□ 0.23
CHPFQ8IZ52 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 HLA-J-202ENST00000469281 1241 ntBASIC16.5■□□□□ 0.23
CHPFQ8IZ52 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 AC104794.3-201ENST00000566840 1248 ntBASIC16.5■□□□□ 0.23
CHPFQ8IZ52 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 ZNF890P-202ENST00000530367 1156 ntBASIC16.49■□□□□ 0.23
CHPFQ8IZ52 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 AL512361.1-201ENST00000554200 418 ntBASIC16.49■□□□□ 0.23
CHPFQ8IZ52 AC010336.2-201ENST00000564226 506 ntBASIC16.49■□□□□ 0.23
CHPFQ8IZ52 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 AC005915.1-201ENST00000624912 2018 ntBASIC16.49■□□□□ 0.23
CHPFQ8IZ52 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 AC011270.2-201ENST00000624293 2550 ntBASIC16.49■□□□□ 0.23
CHPFQ8IZ52 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.49■□□□□ 0.23
CHPFQ8IZ52 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
CHPFQ8IZ52 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 COX5BP8-201ENST00000416911 349 ntBASIC16.48■□□□□ 0.23
CHPFQ8IZ52 GNAQP1-201ENST00000444815 1067 ntBASIC16.48■□□□□ 0.23
CHPFQ8IZ52 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 KRT17P7-201ENST00000451704 1104 ntBASIC16.48■□□□□ 0.23
CHPFQ8IZ52 AC044860.1-202ENST00000559481 777 ntBASIC16.48■□□□□ 0.23
CHPFQ8IZ52 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.48■□□□□ 0.23
CHPFQ8IZ52 TP53TG3HP-202ENST00000569755 579 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms