Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC004449.1-201ENST00000564240 433 ntBASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.06■□□□□ 0.32
SCUBE3Q8IX30 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 AC008677.1-201ENST00000519230 1561 ntBASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 AC008741.2-201ENST00000612792 3115 ntBASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SCUBE3Q8IX30 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 AL513523.2-202ENST00000427283 2040 ntBASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 AL512356.2-201ENST00000546955 174 ntBASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 MIR4453-201ENST00000584019 89 ntBASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 AC003101.2-201ENST00000612557 442 ntBASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 AC093028.1-201ENST00000622998 982 ntBASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms