Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 AL022342.1-201ENST00000400363 863 ntBASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 MED15P5-201ENST00000423150 992 ntBASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 AC018845.2-201ENST00000568326 409 ntBASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 AC027601.4-201ENST00000611259 610 ntBASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 AC007064.4-201ENST00000637740 555 ntBASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC44A2Q8IWA5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 GPAA1P2-202ENST00000606848 1787 ntBASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 MIR940-201ENST00000401276 94 ntBASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 RHOQP3-201ENST00000437982 621 ntBASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 KRT18P2-201ENST00000447938 1258 ntBASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 RNA5SP416-201ENST00000516838 111 ntBASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 AC140113.2-201ENST00000604370 208 ntBASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 AC023141.13-201ENST00000604991 943 ntBASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 AL645728.2-201ENST00000641974 660 ntBASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC44A2Q8IWA5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 AP003680.1-201ENST00000598970 3660 ntBASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC44A2Q8IWA5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 BCAR1-209ENST00000546196 1340 ntBASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 AL591424.1-201ENST00000442569 1213 ntBASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 AL031432.2-201ENST00000566714 459 ntBASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 AL928711.1-201ENST00000570165 459 ntBASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 AC004877.2-201ENST00000623941 599 ntBASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC44A2Q8IWA5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms