Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MRPL20P1-201ENST00000400819 433 ntBASIC16.19■□□□□ 0.18
APLFQ8IW19 CNN2P11-201ENST00000429351 262 ntBASIC16.19■□□□□ 0.18
APLFQ8IW19 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.19■□□□□ 0.18
APLFQ8IW19 CYMP-203ENST00000474680 1263 ntBASIC16.19■□□□□ 0.18
APLFQ8IW19 RFPL4AP1-201ENST00000530883 850 ntBASIC16.19■□□□□ 0.18
APLFQ8IW19 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.19■□□□□ 0.18
APLFQ8IW19 AC018845.2-201ENST00000568326 409 ntBASIC16.19■□□□□ 0.18
APLFQ8IW19 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
APLFQ8IW19 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 AC019129.2-201ENST00000609837 1235 ntBASIC16.19■□□□□ 0.18
APLFQ8IW19 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
APLFQ8IW19 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.19■□□□□ 0.18
APLFQ8IW19 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
APLFQ8IW19 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.19■□□□□ 0.18
APLFQ8IW19 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.18■□□□□ 0.18
APLFQ8IW19 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.18■□□□□ 0.18
APLFQ8IW19 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.18■□□□□ 0.18
APLFQ8IW19 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
APLFQ8IW19 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
APLFQ8IW19 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
APLFQ8IW19 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.18■□□□□ 0.18
APLFQ8IW19 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.18■□□□□ 0.18
APLFQ8IW19 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.18■□□□□ 0.18
APLFQ8IW19 GGTLC5P-201ENST00000617623 998 ntBASIC16.18■□□□□ 0.18
APLFQ8IW19 AL513190.1-201ENST00000621254 727 ntBASIC16.18■□□□□ 0.18
APLFQ8IW19 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 CICP14-201ENST00000629111 2732 ntBASIC16.18■□□□□ 0.18
APLFQ8IW19 BX276092.7-203ENST00000637198 1536 ntBASIC16.18■□□□□ 0.18
APLFQ8IW19 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
APLFQ8IW19 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.18■□□□□ 0.18
APLFQ8IW19 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
APLFQ8IW19 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
APLFQ8IW19 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 AC096734.2-201ENST00000562054 433 ntBASIC16.17■□□□□ 0.18
APLFQ8IW19 PDPK2P-202ENST00000562415 1191 ntBASIC16.17■□□□□ 0.18
APLFQ8IW19 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
APLFQ8IW19 STK25P1-201ENST00000585406 838 ntBASIC16.17■□□□□ 0.18
APLFQ8IW19 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.17■□□□□ 0.18
APLFQ8IW19 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APLFQ8IW19 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms