Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 CXCL1P1-201ENST00000502804 216 ntBASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 MIR4515-201ENST00000584082 81 ntBASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC50Q8IVM0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC50Q8IVM0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 PRAL-201ENST00000624952 3286 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 AC007326.2-201ENST00000624224 7579 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 AC004870.1-201ENST00000315132 882 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 FAM185BP-201ENST00000443595 716 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 AC108751.1-201ENST00000490852 363 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 RN7SL510P-201ENST00000581311 263 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 AC005622.1-201ENST00000636801 1703 ntBASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC50Q8IVM0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 AC144831.1-201ENST00000573312 2656 ntBASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC50Q8IVM0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms