Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.04■□□□□ -0
VRK2Q86Y07 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.03■□□□□ -0
VRK2Q86Y07 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
VRK2Q86Y07 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 WASH6P-202ENST00000359512 1437 ntBASIC15.03■□□□□ -0
VRK2Q86Y07 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 TSPY26P-202ENST00000565928 3884 ntBASIC15.03■□□□□ -0
VRK2Q86Y07 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 AP002472.1-201ENST00000577490 586 ntBASIC15.03■□□□□ -0
VRK2Q86Y07 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.03■□□□□ -0
VRK2Q86Y07 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.03■□□□□ -0
VRK2Q86Y07 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.03■□□□□ -0
VRK2Q86Y07 AC120114.3-201ENST00000611923 658 ntBASIC15.03■□□□□ -0
VRK2Q86Y07 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.03■□□□□ -0
VRK2Q86Y07 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
VRK2Q86Y07 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
VRK2Q86Y07 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
VRK2Q86Y07 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.03■□□□□ -0
VRK2Q86Y07 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.03■□□□□ -0
VRK2Q86Y07 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
VRK2Q86Y07 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
VRK2Q86Y07 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
VRK2Q86Y07 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.02■□□□□ -0
VRK2Q86Y07 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
VRK2Q86Y07 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.02■□□□□ -0
VRK2Q86Y07 AC140113.2-201ENST00000604370 208 ntBASIC15.02■□□□□ -0
VRK2Q86Y07 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VRK2Q86Y07 BX640515.1-201ENST00000617215 977 ntBASIC15.02■□□□□ -0
VRK2Q86Y07 AL161645.1-201ENST00000622716 1255 ntBASIC15.02■□□□□ -0
VRK2Q86Y07 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
VRK2Q86Y07 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
VRK2Q86Y07 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
VRK2Q86Y07 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
VRK2Q86Y07 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
VRK2Q86Y07 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.02□□□□□ -0.01
VRK2Q86Y07 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.02□□□□□ -0.01
VRK2Q86Y07 AL589702.1-201ENST00000641229 1509 ntBASIC15.02□□□□□ -0.01
VRK2Q86Y07 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
VRK2Q86Y07 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VRK2Q86Y07 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.01□□□□□ -0.01
VRK2Q86Y07 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK2Q86Y07 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.01□□□□□ -0.01
VRK2Q86Y07 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK2Q86Y07 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
VRK2Q86Y07 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VRK2Q86Y07 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
VRK2Q86Y07 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.01□□□□□ -0.01
VRK2Q86Y07 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.01□□□□□ -0.01
VRK2Q86Y07 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
VRK2Q86Y07 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK2Q86Y07 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK2Q86Y07 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK2Q86Y07 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK2Q86Y07 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK2Q86Y07 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VRK2Q86Y07 HAUS4P1-201ENST00000406739 1145 ntBASIC15.01□□□□□ -0.01
VRK2Q86Y07 MED15P5-201ENST00000423150 992 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms