Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.07■□□□□ 0
TUBA1AQ71U36 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.07■□□□□ 0
TUBA1AQ71U36 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.07■□□□□ 0
TUBA1AQ71U36 AL356488.2-201ENST00000602755 427 ntBASIC15.07■□□□□ 0
TUBA1AQ71U36 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
TUBA1AQ71U36 MIR1199-201ENST00000621445 119 ntBASIC15.07■□□□□ 0
TUBA1AQ71U36 AC117500.6-201ENST00000624871 588 ntBASIC15.07■□□□□ 0
TUBA1AQ71U36 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.07■□□□□ 0
TUBA1AQ71U36 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 PPT1-215ENST00000641471 2368 ntBASIC15.07■□□□□ 0
TUBA1AQ71U36 IL9RP2-201ENST00000423948 1312 ntBASIC15.07■□□□□ 0
TUBA1AQ71U36 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.07■□□□□ 0
TUBA1AQ71U36 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.07■□□□□ 0
TUBA1AQ71U36 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.07■□□□□ 0
TUBA1AQ71U36 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TUBA1AQ71U36 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBA1AQ71U36 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TUBA1AQ71U36 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.06■□□□□ 0
TUBA1AQ71U36 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.06■□□□□ 0
TUBA1AQ71U36 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TUBA1AQ71U36 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.06■□□□□ 0
TUBA1AQ71U36 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.06■□□□□ 0
TUBA1AQ71U36 AC073621.1-201ENST00000392730 636 ntBASIC15.06■□□□□ 0
TUBA1AQ71U36 ACTG1P4-201ENST00000425123 1122 ntBASIC15.06■□□□□ 0
TUBA1AQ71U36 KRT18P27-201ENST00000427733 1299 ntBASIC15.06■□□□□ 0
TUBA1AQ71U36 SLC25A1P1-201ENST00000528351 927 ntBASIC15.06■□□□□ 0
TUBA1AQ71U36 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.06■□□□□ 0
TUBA1AQ71U36 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.06■□□□□ 0
TUBA1AQ71U36 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.06■□□□□ 0
TUBA1AQ71U36 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.06■□□□□ 0
TUBA1AQ71U36 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.06■□□□□ 0
TUBA1AQ71U36 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TUBA1AQ71U36 AL137784.3-201ENST00000623858 2288 ntBASIC15.06■□□□□ 0
TUBA1AQ71U36 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
TUBA1AQ71U36 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TUBA1AQ71U36 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 AC138035.3-201ENST00000622706 2791 ntBASIC15.06■□□□□ 0
TUBA1AQ71U36 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.06■□□□□ 0
TUBA1AQ71U36 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TUBA1AQ71U36 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.06■□□□□ 0
TUBA1AQ71U36 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.06■□□□□ 0
TUBA1AQ71U36 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.05■□□□□ 0
TUBA1AQ71U36 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.05■□□□□ 0
TUBA1AQ71U36 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.05■□□□□ 0
TUBA1AQ71U36 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TUBA1AQ71U36 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TUBA1AQ71U36 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TUBA1AQ71U36 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
TUBA1AQ71U36 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TUBA1AQ71U36 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.05■□□□□ 0
TUBA1AQ71U36 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.05■□□□□ 0
TUBA1AQ71U36 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TUBA1AQ71U36 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TUBA1AQ71U36 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TUBA1AQ71U36 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TUBA1AQ71U36 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.05■□□□□ -0
TUBA1AQ71U36 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.05■□□□□ -0
TUBA1AQ71U36 AC136632.2-201ENST00000512891 861 ntBASIC15.05■□□□□ -0
TUBA1AQ71U36 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.05■□□□□ -0
TUBA1AQ71U36 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.05■□□□□ -0
TUBA1AQ71U36 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.05■□□□□ -0
TUBA1AQ71U36 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.05■□□□□ -0
TUBA1AQ71U36 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.05■□□□□ -0
TUBA1AQ71U36 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms