Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 RNA5SP415-201ENST00000517246 115 ntBASIC15.15■□□□□ 0.02
REEP3Q6NUK4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 AC104692.2-201ENST00000603054 253 ntBASIC15.15■□□□□ 0.02
REEP3Q6NUK4 AC023141.13-201ENST00000604991 943 ntBASIC15.15■□□□□ 0.02
REEP3Q6NUK4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 AP003680.1-201ENST00000598970 3660 ntBASIC15.15■□□□□ 0.02
REEP3Q6NUK4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.15■□□□□ 0.02
REEP3Q6NUK4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
REEP3Q6NUK4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.14■□□□□ 0.01
REEP3Q6NUK4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 AC103702.1-201ENST00000548801 2630 ntBASIC15.14■□□□□ 0.01
REEP3Q6NUK4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
REEP3Q6NUK4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.14■□□□□ 0.01
REEP3Q6NUK4 AC073347.1-201ENST00000421633 2643 ntBASIC15.13■□□□□ 0.01
REEP3Q6NUK4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 AC011270.2-201ENST00000624293 2550 ntBASIC15.13■□□□□ 0.01
REEP3Q6NUK4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 AC140658.5-201ENST00000438532 169 ntBASIC15.13■□□□□ 0.01
REEP3Q6NUK4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.13■□□□□ 0.01
REEP3Q6NUK4 IGHV3-22-201ENST00000520721 359 ntBASIC15.13■□□□□ 0.01
REEP3Q6NUK4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms