Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.72■□□□□ 0.11
RNF220Q5VTB9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 AL121772.3-201ENST00000610840 674 ntBASIC15.71■□□□□ 0.11
RNF220Q5VTB9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 SSR4P1-203ENST00000599569 2260 ntBASIC15.71■□□□□ 0.11
RNF220Q5VTB9 AC005252.3-201ENST00000623855 2258 ntBASIC15.71■□□□□ 0.11
RNF220Q5VTB9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RNF220Q5VTB9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF220Q5VTB9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.71■□□□□ 0.1
RNF220Q5VTB9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF220Q5VTB9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF220Q5VTB9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.71■□□□□ 0.1
RNF220Q5VTB9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RNF220Q5VTB9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RNF220Q5VTB9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RNF220Q5VTB9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 AC005912.2-201ENST00000619492 2400 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 AL590787.1-201ENST00000568856 1315 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 CICP23-201ENST00000605013 2741 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 BX005266.1-201ENST00000473402 457 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 KRT18P31-201ENST00000506277 1292 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 NKAPP1-205ENST00000585790 367 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 AL732292.2-201ENST00000609649 430 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 AL021920.2-201ENST00000624828 1351 ntBASIC15.7■□□□□ 0.1
RNF220Q5VTB9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF220Q5VTB9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RNF220Q5VTB9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms