Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AL596276.2-201ENST00000447525 331 ntBASIC13.84□□□□□ -0.19
LRRK2Q5S007 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AC006453.4-201ENST00000636949 1252 ntBASIC13.84□□□□□ -0.19
LRRK2Q5S007 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AP000974.1-201ENST00000623909 2387 ntBASIC13.84□□□□□ -0.19
LRRK2Q5S007 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 AC234782.1-201ENST00000451950 919 ntBASIC13.84□□□□□ -0.19
LRRK2Q5S007 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 PGAM1P5-201ENST00000548011 764 ntBASIC13.84□□□□□ -0.19
LRRK2Q5S007 NPM1P43-201ENST00000558669 786 ntBASIC13.84□□□□□ -0.19
LRRK2Q5S007 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LRRK2Q5S007 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LRRK2Q5S007 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRK2Q5S007 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
LRRK2Q5S007 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LRRK2Q5S007 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.83□□□□□ -0.19
LRRK2Q5S007 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
LRRK2Q5S007 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 GGT4P-201ENST00000623672 1708 ntBASIC13.83□□□□□ -0.2
LRRK2Q5S007 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 CTBP2P4-201ENST00000513884 920 ntBASIC13.83□□□□□ -0.2
LRRK2Q5S007 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 GPAA1P2-202ENST00000606848 1787 ntBASIC13.83□□□□□ -0.2
LRRK2Q5S007 AL138709.1-201ENST00000614840 1693 ntBASIC13.83□□□□□ -0.2
LRRK2Q5S007 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 U82695.1-201ENST00000635752 1889 ntBASIC13.83□□□□□ -0.2
LRRK2Q5S007 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.83□□□□□ -0.2
LRRK2Q5S007 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRK2Q5S007 AL512652.2-201ENST00000625156 1716 ntBASIC13.82□□□□□ -0.2
LRRK2Q5S007 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRRK2Q5S007 AL354751.1-201ENST00000412768 1863 ntBASIC13.82□□□□□ -0.2
LRRK2Q5S007 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRK2Q5S007 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms