Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 IGHV3-72-202ENST00000621503 303 ntBASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 AL691432.1-201ENST00000596308 1422 ntBASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNFT1Q5M7Z0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 AC098614.1-201ENST00000368528 745 ntBASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 FO393414.2-201ENST00000405153 598 ntBASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 AC098850.1-201ENST00000419919 790 ntBASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 U91328.1-201ENST00000437528 223 ntBASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 REXO1L8P-201ENST00000604378 1897 ntBASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNFT1Q5M7Z0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AGGF1P2-201ENST00000426656 2106 ntBASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 OR8S1-201ENST00000310194 1080 ntBASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNFT1Q5M7Z0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms