Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
USP41Q3LFD5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
USP41Q3LFD5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
USP41Q3LFD5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.2■□□□□ 0.34
USP41Q3LFD5 HLA-A-202ENST00000376806 1854 ntBASIC17.2■□□□□ 0.34
USP41Q3LFD5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
USP41Q3LFD5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP41Q3LFD5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP41Q3LFD5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.2■□□□□ 0.34
USP41Q3LFD5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP41Q3LFD5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 MST1L-201ENST00000442552 2185 ntBASIC17.19■□□□□ 0.34
USP41Q3LFD5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 AL136982.4-201ENST00000437689 1740 ntBASIC17.19■□□□□ 0.34
USP41Q3LFD5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 RN7SL752P-201ENST00000463779 287 ntBASIC17.19■□□□□ 0.34
USP41Q3LFD5 POU5F1P6-201ENST00000466990 990 ntBASIC17.19■□□□□ 0.34
USP41Q3LFD5 MEIS3P1-201ENST00000495167 958 ntBASIC17.19■□□□□ 0.34
USP41Q3LFD5 AC011495.1-201ENST00000498085 584 ntBASIC17.19■□□□□ 0.34
USP41Q3LFD5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 AC007431.3-201ENST00000623221 587 ntBASIC17.19■□□□□ 0.34
USP41Q3LFD5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 CYP4F24P-201ENST00000586049 1580 ntBASIC17.19■□□□□ 0.34
USP41Q3LFD5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP41Q3LFD5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
USP41Q3LFD5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 AL008721.1-201ENST00000609964 604 ntBASIC17.18■□□□□ 0.34
USP41Q3LFD5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 AC078925.2-201ENST00000624013 1973 ntBASIC17.18■□□□□ 0.34
USP41Q3LFD5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
USP41Q3LFD5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 RNF216P1-203ENST00000404404 2427 ntBASIC17.18■□□□□ 0.34
USP41Q3LFD5 CICP6-201ENST00000457191 2729 ntBASIC17.18■□□□□ 0.34
USP41Q3LFD5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP41Q3LFD5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP41Q3LFD5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP41Q3LFD5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP41Q3LFD5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP41Q3LFD5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP41Q3LFD5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms