Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 AC131009.4-201ENST00000624048 1740 ntBASIC12.51□□□□□ -0.41
HIST1H1AQ02539 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.51□□□□□ -0.41
HIST1H1AQ02539 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 RPS15P9-201ENST00000494093 319 ntBASIC12.51□□□□□ -0.41
HIST1H1AQ02539 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 GGTLC5P-201ENST00000617623 998 ntBASIC12.51□□□□□ -0.41
HIST1H1AQ02539 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.51□□□□□ -0.41
HIST1H1AQ02539 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H1AQ02539 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 SLC25A6P2-201ENST00000497974 877 ntBASIC12.5□□□□□ -0.41
HIST1H1AQ02539 AC136632.2-201ENST00000512891 861 ntBASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.5□□□□□ -0.41
HIST1H1AQ02539 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.5□□□□□ -0.41
HIST1H1AQ02539 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms