Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.31■□□□□ 0.52
CCNA1P78396 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.31■□□□□ 0.52
CCNA1P78396 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.31■□□□□ 0.52
CCNA1P78396 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCNA1P78396 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCNA1P78396 CROCCP1-201ENST00000426910 5675 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.3■□□□□ 0.52
CCNA1P78396 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCNA1P78396 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.3■□□□□ 0.52
CCNA1P78396 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 ANKRD19P-201ENST00000338192 862 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.3■□□□□ 0.52
CCNA1P78396 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCNA1P78396 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCNA1P78396 BNIP3P42-201ENST00000454982 569 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 RPL13AP25-201ENST00000484130 612 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.3■□□□□ 0.52
CCNA1P78396 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.3■□□□□ 0.52
CCNA1P78396 TDH-203ENST00000531764 1110 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.3■□□□□ 0.52
CCNA1P78396 ENPP7P5-201ENST00000541031 1031 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.3■□□□□ 0.52
CCNA1P78396 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.3■□□□□ 0.52
CCNA1P78396 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.3■□□□□ 0.52
CCNA1P78396 MIR5189-201ENST00000577370 114 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 MIR4525-201ENST00000580000 75 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.3■□□□□ 0.52
CCNA1P78396 BNIP3P29-201ENST00000598302 571 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 AC011447.5-201ENST00000616168 564 ntBASIC18.3■□□□□ 0.52
CCNA1P78396 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.3■□□□□ 0.52
CCNA1P78396 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.3■□□□□ 0.52
CCNA1P78396 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.3■□□□□ 0.52
CCNA1P78396 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.3■□□□□ 0.52
CCNA1P78396 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CCNA1P78396 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCNA1P78396 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.3■□□□□ 0.52
CCNA1P78396 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCNA1P78396 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 AC139713.2-201ENST00000641328 2723 ntBASIC18.29■□□□□ 0.52
CCNA1P78396 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.29■□□□□ 0.52
CCNA1P78396 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 AL592424.1-201ENST00000563624 1536 ntBASIC18.29■□□□□ 0.52
CCNA1P78396 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.29■□□□□ 0.52
CCNA1P78396 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.29■□□□□ 0.52
CCNA1P78396 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCNA1P78396 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCNA1P78396 FAM86MP-201ENST00000340703 885 ntBASIC18.29■□□□□ 0.52
CCNA1P78396 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CCNA1P78396 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.29■□□□□ 0.52
CCNA1P78396 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 CTBP2P5-201ENST00000454986 1264 ntBASIC18.29■□□□□ 0.52
CCNA1P78396 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.29■□□□□ 0.52
CCNA1P78396 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.29■□□□□ 0.52
CCNA1P78396 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.29■□□□□ 0.52
CCNA1P78396 BRI3BPP1-201ENST00000594224 787 ntBASIC18.29■□□□□ 0.52
CCNA1P78396 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.29■□□□□ 0.52
CCNA1P78396 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.29■□□□□ 0.52
CCNA1P78396 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.29■□□□□ 0.52
CCNA1P78396 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.29■□□□□ 0.52
CCNA1P78396 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.29■□□□□ 0.52
CCNA1P78396 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCNA1P78396 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNA1P78396 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCNA1P78396 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
CCNA1P78396 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNA1P78396 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNA1P78396 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCNA1P78396 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCNA1P78396 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.28■□□□□ 0.52
CCNA1P78396 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCNA1P78396 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCNA1P78396 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCNA1P78396 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCNA1P78396 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.28■□□□□ 0.52
CCNA1P78396 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.28■□□□□ 0.52
CCNA1P78396 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.28■□□□□ 0.52
CCNA1P78396 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNA1P78396 FAM8A2P-201ENST00000528813 1142 ntBASIC18.28■□□□□ 0.52
CCNA1P78396 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms