Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.3■□□□□ 0.2
AP1S1P61966 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
AP1S1P61966 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
AP1S1P61966 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.3■□□□□ 0.2
AP1S1P61966 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 AC004987.2-201ENST00000395959 1148 ntBASIC16.3■□□□□ 0.2
AP1S1P61966 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.3■□□□□ 0.2
AP1S1P61966 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.3■□□□□ 0.2
AP1S1P61966 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AP1S1P61966 HLA-V-204ENST00000476601 1289 ntBASIC16.3■□□□□ 0.2
AP1S1P61966 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.3■□□□□ 0.2
AP1S1P61966 AC093512.1-201ENST00000617969 520 ntBASIC16.3■□□□□ 0.2
AP1S1P61966 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
AP1S1P61966 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.3■□□□□ 0.2
AP1S1P61966 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP1S1P61966 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 CYP4F24P-201ENST00000586049 1580 ntBASIC16.3■□□□□ 0.2
AP1S1P61966 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP1S1P61966 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
AP1S1P61966 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP1S1P61966 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
AP1S1P61966 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
AP1S1P61966 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S1P61966 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
AP1S1P61966 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
AP1S1P61966 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP1S1P61966 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
AP1S1P61966 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
AP1S1P61966 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.29■□□□□ 0.2
AP1S1P61966 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.29■□□□□ 0.2
AP1S1P61966 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.29■□□□□ 0.2
AP1S1P61966 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S1P61966 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S1P61966 AC027796.2-201ENST00000575326 344 ntBASIC16.29■□□□□ 0.2
AP1S1P61966 AL589739.1-201ENST00000607720 493 ntBASIC16.29■□□□□ 0.2
AP1S1P61966 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 AC073592.8-201ENST00000624126 511 ntBASIC16.29■□□□□ 0.2
AP1S1P61966 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
AP1S1P61966 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP1S1P61966 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
AP1S1P61966 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.29■□□□□ 0.2
AP1S1P61966 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP1S1P61966 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.29■□□□□ 0.2
AP1S1P61966 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S1P61966 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S1P61966 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S1P61966 AL136982.4-201ENST00000437689 1740 ntBASIC16.28■□□□□ 0.2
AP1S1P61966 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP1S1P61966 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.28■□□□□ 0.2
AP1S1P61966 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 MIR943-201ENST00000401286 94 ntBASIC16.28■□□□□ 0.2
AP1S1P61966 SPDYE17-201ENST00000412399 783 ntBASIC16.28■□□□□ 0.2
AP1S1P61966 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 DUX4L27-201ENST00000554796 1261 ntBASIC16.28■□□□□ 0.2
AP1S1P61966 AL079307.3-201ENST00000556114 283 ntBASIC16.28■□□□□ 0.2
AP1S1P61966 SPDYE12P-201ENST00000618416 771 ntBASIC16.28■□□□□ 0.2
AP1S1P61966 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AP1S1P61966 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S1P61966 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
AP1S1P61966 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.28■□□□□ 0.2
AP1S1P61966 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
AP1S1P61966 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.28■□□□□ 0.2
AP1S1P61966 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP1S1P61966 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AP1S1P61966 AC124067.4-201ENST00000519691 2379 ntBASIC16.28■□□□□ 0.2
AP1S1P61966 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms