Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDC42P60953 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDC42P60953 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 PI4KAP1-204ENST00000612579 1703 ntBASIC14.9□□□□□ -0.02
CDC42P60953 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CDC42P60953 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.9□□□□□ -0.02
CDC42P60953 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 HCG4-201ENST00000418983 998 ntBASIC14.9□□□□□ -0.02
CDC42P60953 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.9□□□□□ -0.02
CDC42P60953 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42P60953 MIR5100-201ENST00000579544 119 ntBASIC14.9□□□□□ -0.02
CDC42P60953 AP002414.4-201ENST00000589764 1148 ntBASIC14.9□□□□□ -0.02
CDC42P60953 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42P60953 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42P60953 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.9□□□□□ -0.02
CDC42P60953 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CDC42P60953 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDC42P60953 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDC42P60953 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDC42P60953 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42P60953 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 AC087481.3-201ENST00000602886 1894 ntBASIC14.89□□□□□ -0.03
CDC42P60953 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDC42P60953 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42P60953 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42P60953 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
CDC42P60953 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 AC005412.3-201ENST00000580309 715 ntBASIC14.89□□□□□ -0.03
CDC42P60953 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 AC005332.1-201ENST00000577698 1310 ntBASIC14.89□□□□□ -0.03
CDC42P60953 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDC42P60953 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDC42P60953 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CDC42P60953 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDC42P60953 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.89□□□□□ -0.03
CDC42P60953 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CDC42P60953 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDC42P60953 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CDC42P60953 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42P60953 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDC42P60953 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms