Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC148477.4-201ENST00000613430 1793 ntBASIC15.98■□□□□ 0.15
GTF2A1P52655 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.98■□□□□ 0.15
GTF2A1P52655 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.98■□□□□ 0.15
GTF2A1P52655 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
GTF2A1P52655 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
GTF2A1P52655 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 MFAP1P1-201ENST00000442257 1255 ntBASIC15.98■□□□□ 0.15
GTF2A1P52655 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 SLC25A1P4-201ENST00000567977 778 ntBASIC15.98■□□□□ 0.15
GTF2A1P52655 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.98■□□□□ 0.15
GTF2A1P52655 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
GTF2A1P52655 AC006058.3-201ENST00000606217 1069 ntBASIC15.98■□□□□ 0.15
GTF2A1P52655 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.98■□□□□ 0.15
GTF2A1P52655 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
GTF2A1P52655 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.98■□□□□ 0.15
GTF2A1P52655 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
GTF2A1P52655 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.98■□□□□ 0.15
GTF2A1P52655 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
GTF2A1P52655 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.98■□□□□ 0.15
GTF2A1P52655 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GTF2A1P52655 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.97■□□□□ 0.15
GTF2A1P52655 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
GTF2A1P52655 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.97■□□□□ 0.15
GTF2A1P52655 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GTF2A1P52655 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GTF2A1P52655 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.97■□□□□ 0.15
GTF2A1P52655 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.97■□□□□ 0.15
GTF2A1P52655 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.97■□□□□ 0.15
GTF2A1P52655 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.97■□□□□ 0.15
GTF2A1P52655 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.97■□□□□ 0.15
GTF2A1P52655 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.97■□□□□ 0.15
GTF2A1P52655 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.97■□□□□ 0.15
GTF2A1P52655 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GTF2A1P52655 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
GTF2A1P52655 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GTF2A1P52655 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.97■□□□□ 0.15
GTF2A1P52655 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
GTF2A1P52655 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.97■□□□□ 0.15
GTF2A1P52655 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
GTF2A1P52655 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.96■□□□□ 0.15
GTF2A1P52655 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
GTF2A1P52655 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.96■□□□□ 0.15
GTF2A1P52655 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.96■□□□□ 0.15
GTF2A1P52655 LINC01311-201ENST00000565162 1445 ntBASIC15.96■□□□□ 0.15
GTF2A1P52655 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 AC011700.1-201ENST00000610409 2627 ntBASIC15.96■□□□□ 0.15
GTF2A1P52655 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
GTF2A1P52655 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 FAM197Y1-201ENST00000421178 764 ntBASIC15.96■□□□□ 0.15
GTF2A1P52655 KRT18P23-201ENST00000435622 1283 ntBASIC15.96■□□□□ 0.15
GTF2A1P52655 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.96■□□□□ 0.15
GTF2A1P52655 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.96■□□□□ 0.15
GTF2A1P52655 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 AL024508.2-201ENST00000607749 1894 ntBASIC15.96■□□□□ 0.15
GTF2A1P52655 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.96■□□□□ 0.15
GTF2A1P52655 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
GTF2A1P52655 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.96■□□□□ 0.15
GTF2A1P52655 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
GTF2A1P52655 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GTF2A1P52655 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.96■□□□□ 0.15
GTF2A1P52655 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.96■□□□□ 0.14
GTF2A1P52655 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GTF2A1P52655 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.96■□□□□ 0.14
GTF2A1P52655 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms