Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.23■□□□□ 0.35
CLCNKBP51801 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CLCNKBP51801 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKBP51801 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
CLCNKBP51801 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 PCDHA14-201ENST00000506751 2298 ntBASIC17.23■□□□□ 0.35
CLCNKBP51801 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLCNKBP51801 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CLCNKBP51801 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKBP51801 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.23■□□□□ 0.35
CLCNKBP51801 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCNKBP51801 AC063926.2-201ENST00000623766 1308 ntBASIC17.22■□□□□ 0.35
CLCNKBP51801 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CLCNKBP51801 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
CLCNKBP51801 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.22■□□□□ 0.35
CLCNKBP51801 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 DFFBP1-201ENST00000433250 979 ntBASIC17.22■□□□□ 0.35
CLCNKBP51801 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.22■□□□□ 0.35
CLCNKBP51801 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.22■□□□□ 0.35
CLCNKBP51801 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.22■□□□□ 0.35
CLCNKBP51801 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.22■□□□□ 0.35
CLCNKBP51801 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLCNKBP51801 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLCNKBP51801 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 BNIP3P1-202ENST00000550043 1585 ntBASIC17.22■□□□□ 0.35
CLCNKBP51801 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLCNKBP51801 KRT8P37-201ENST00000451609 1420 ntBASIC17.21■□□□□ 0.35
CLCNKBP51801 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCNKBP51801 OR6D1P-203ENST00000641209 4860 ntBASIC17.21■□□□□ 0.35
CLCNKBP51801 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLCNKBP51801 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKBP51801 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKBP51801 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLCNKBP51801 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKBP51801 GAPDHP21-201ENST00000450301 1010 ntBASIC17.21■□□□□ 0.35
CLCNKBP51801 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCNKBP51801 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCNKBP51801 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.21■□□□□ 0.35
CLCNKBP51801 AC140912.1-201ENST00000577171 1054 ntBASIC17.21■□□□□ 0.35
CLCNKBP51801 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.21■□□□□ 0.35
CLCNKBP51801 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKBP51801 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLCNKBP51801 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKBP51801 AL358472.5-202ENST00000641448 1267 ntBASIC17.21■□□□□ 0.35
CLCNKBP51801 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLCNKBP51801 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CLCNKBP51801 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CLCNKBP51801 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCNKBP51801 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCNKBP51801 AC092364.2-201ENST00000596710 2692 ntBASIC17.21■□□□□ 0.35
CLCNKBP51801 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CLCNKBP51801 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms