Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP11P51784 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.27■□□□□ 0.52
USP11P51784 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
USP11P51784 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP11P51784 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
USP11P51784 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP11P51784 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.27■□□□□ 0.51
USP11P51784 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
USP11P51784 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
USP11P51784 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
USP11P51784 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP11P51784 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.27■□□□□ 0.51
USP11P51784 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
USP11P51784 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
USP11P51784 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.27■□□□□ 0.51
USP11P51784 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.26■□□□□ 0.51
USP11P51784 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
USP11P51784 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.26■□□□□ 0.51
USP11P51784 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP11P51784 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
USP11P51784 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.26■□□□□ 0.51
USP11P51784 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP11P51784 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP11P51784 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP11P51784 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
USP11P51784 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
USP11P51784 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.26■□□□□ 0.51
USP11P51784 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.26■□□□□ 0.51
USP11P51784 AC005498.2-205ENST00000593218 784 ntBASIC18.26■□□□□ 0.51
USP11P51784 TEX28P1-201ENST00000613479 1221 ntBASIC18.26■□□□□ 0.51
USP11P51784 TEX28P2-201ENST00000617764 1221 ntBASIC18.26■□□□□ 0.51
USP11P51784 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.26■□□□□ 0.51
USP11P51784 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP11P51784 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.26■□□□□ 0.51
USP11P51784 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP11P51784 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.26■□□□□ 0.51
USP11P51784 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.26■□□□□ 0.51
USP11P51784 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP11P51784 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.26■□□□□ 0.51
USP11P51784 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.25■□□□□ 0.51
USP11P51784 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USP11P51784 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 MIR770-201ENST00000390219 98 ntBASIC18.25■□□□□ 0.51
USP11P51784 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.25■□□□□ 0.51
USP11P51784 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.25■□□□□ 0.51
USP11P51784 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.25■□□□□ 0.51
USP11P51784 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
USP11P51784 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.25■□□□□ 0.51
USP11P51784 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.25■□□□□ 0.51
USP11P51784 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.25■□□□□ 0.51
USP11P51784 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.25■□□□□ 0.51
USP11P51784 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.25■□□□□ 0.51
USP11P51784 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
USP11P51784 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
USP11P51784 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
USP11P51784 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP11P51784 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
USP11P51784 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
USP11P51784 KRT8P37-201ENST00000451609 1420 ntBASIC18.24■□□□□ 0.51
USP11P51784 AC100757.3-201ENST00000622361 1406 ntBASIC18.24■□□□□ 0.51
USP11P51784 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.24■□□□□ 0.51
USP11P51784 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.24■□□□□ 0.51
USP11P51784 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.24■□□□□ 0.51
USP11P51784 AC069224.1-201ENST00000566372 1715 ntBASIC18.24■□□□□ 0.51
USP11P51784 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
USP11P51784 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.24■□□□□ 0.51
USP11P51784 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 AC011477.6-201ENST00000604980 1927 ntBASIC18.24■□□□□ 0.51
USP11P51784 AL513523.2-202ENST00000427283 2040 ntBASIC18.24■□□□□ 0.51
USP11P51784 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
USP11P51784 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP11P51784 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.24■□□□□ 0.51
USP11P51784 AC241585.1-201ENST00000433527 519 ntBASIC18.24■□□□□ 0.51
USP11P51784 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.24■□□□□ 0.51
USP11P51784 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.24■□□□□ 0.51
USP11P51784 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.24■□□□□ 0.51
USP11P51784 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms