Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.04■□□□□ 0.64
NEDD4P46934 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.03■□□□□ 0.64
NEDD4P46934 RPL37AP1-201ENST00000412502 279 ntBASIC19.03■□□□□ 0.64
NEDD4P46934 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 AC097493.3-201ENST00000509725 367 ntBASIC19.03■□□□□ 0.64
NEDD4P46934 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.03■□□□□ 0.64
NEDD4P46934 AL079307.3-201ENST00000556114 283 ntBASIC19.03■□□□□ 0.64
NEDD4P46934 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.03■□□□□ 0.64
NEDD4P46934 AL158211.3-201ENST00000607385 239 ntBASIC19.03■□□□□ 0.64
NEDD4P46934 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.03■□□□□ 0.64
NEDD4P46934 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.03■□□□□ 0.64
NEDD4P46934 CDC14C-201ENST00000428251 1719 ntBASIC19.03■□□□□ 0.64
NEDD4P46934 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NEDD4P46934 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NEDD4P46934 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NEDD4P46934 BNIP3P1-202ENST00000550043 1585 ntBASIC19.03■□□□□ 0.64
NEDD4P46934 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.03■□□□□ 0.64
NEDD4P46934 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.03■□□□□ 0.64
NEDD4P46934 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NEDD4P46934 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEDD4P46934 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NEDD4P46934 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.02■□□□□ 0.64
NEDD4P46934 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.02■□□□□ 0.64
NEDD4P46934 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.02■□□□□ 0.64
NEDD4P46934 AC026979.3-201ENST00000607315 403 ntBASIC19.02■□□□□ 0.64
NEDD4P46934 AL589739.1-201ENST00000607720 493 ntBASIC19.02■□□□□ 0.64
NEDD4P46934 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.02■□□□□ 0.64
NEDD4P46934 AC073592.8-201ENST00000624126 511 ntBASIC19.02■□□□□ 0.64
NEDD4P46934 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.02■□□□□ 0.64
NEDD4P46934 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.02■□□□□ 0.64
NEDD4P46934 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
NEDD4P46934 AC008741.2-201ENST00000612792 3115 ntBASIC19.02■□□□□ 0.64
NEDD4P46934 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.02■□□□□ 0.64
NEDD4P46934 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.02■□□□□ 0.64
NEDD4P46934 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEDD4P46934 LINC02447-202ENST00000501888 2146 ntBASIC19.02■□□□□ 0.64
NEDD4P46934 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
NEDD4P46934 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEDD4P46934 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.02■□□□□ 0.63
NEDD4P46934 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEDD4P46934 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEDD4P46934 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.02■□□□□ 0.63
NEDD4P46934 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
NEDD4P46934 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
NEDD4P46934 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEDD4P46934 AC022188.1-201ENST00000620960 1664 ntBASIC19.01■□□□□ 0.63
NEDD4P46934 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEDD4P46934 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.01■□□□□ 0.63
NEDD4P46934 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.01■□□□□ 0.63
NEDD4P46934 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
NEDD4P46934 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.01■□□□□ 0.63
NEDD4P46934 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.01■□□□□ 0.63
NEDD4P46934 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.01■□□□□ 0.63
NEDD4P46934 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.01■□□□□ 0.63
NEDD4P46934 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NEDD4P46934 TEX28P1-201ENST00000613479 1221 ntBASIC19.01■□□□□ 0.63
NEDD4P46934 TEX28P2-201ENST00000617764 1221 ntBASIC19.01■□□□□ 0.63
NEDD4P46934 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NEDD4P46934 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEDD4P46934 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEDD4P46934 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.01■□□□□ 0.63
NEDD4P46934 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEDD4P46934 CETN4P-206ENST00000642099 2168 ntBASIC19.01■□□□□ 0.63
NEDD4P46934 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEDD4P46934 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEDD4P46934 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.01■□□□□ 0.63
NEDD4P46934 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEDD4P46934 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NEDD4P46934 HLA-V-204ENST00000476601 1289 ntBASIC19■□□□□ 0.63
NEDD4P46934 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms