Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 AC093433.1-201ENST00000458048 571 ntBASIC17.85■□□□□ 0.45
HTTP42858 AC023310.1-201ENST00000554836 735 ntBASIC17.85■□□□□ 0.45
HTTP42858 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HTTP42858 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HTTP42858 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.85■□□□□ 0.45
HTTP42858 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.85■□□□□ 0.45
HTTP42858 PCDHB18P-201ENST00000524813 2368 ntBASIC17.85■□□□□ 0.45
HTTP42858 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.85■□□□□ 0.45
HTTP42858 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HTTP42858 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.85■□□□□ 0.45
HTTP42858 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.85■□□□□ 0.45
HTTP42858 RN7SL11P-201ENST00000471305 293 ntBASIC17.85■□□□□ 0.45
HTTP42858 AC126915.1-201ENST00000522847 1038 ntBASIC17.85■□□□□ 0.45
HTTP42858 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.85■□□□□ 0.45
HTTP42858 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.85■□□□□ 0.45
HTTP42858 AC000095.1-201ENST00000603208 874 ntBASIC17.85■□□□□ 0.45
HTTP42858 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.85■□□□□ 0.45
HTTP42858 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.85■□□□□ 0.45
HTTP42858 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.85■□□□□ 0.45
HTTP42858 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.85■□□□□ 0.45
HTTP42858 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.85■□□□□ 0.45
HTTP42858 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HTTP42858 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.85■□□□□ 0.45
HTTP42858 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.85■□□□□ 0.45
HTTP42858 YRDCP1-201ENST00000621419 643 ntBASIC17.85■□□□□ 0.45
HTTP42858 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.84■□□□□ 0.45
HTTP42858 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.84■□□□□ 0.45
HTTP42858 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.84■□□□□ 0.45
HTTP42858 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 PCGF3-213ENST00000620529 1899 ntBASIC17.84■□□□□ 0.45
HTTP42858 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.84■□□□□ 0.45
HTTP42858 RNF216P1-203ENST00000404404 2427 ntBASIC17.84■□□□□ 0.45
HTTP42858 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 AL023775.1-201ENST00000454907 1746 ntBASIC17.84■□□□□ 0.45
HTTP42858 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HTTP42858 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HTTP42858 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.84■□□□□ 0.45
HTTP42858 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.84■□□□□ 0.45
HTTP42858 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HTTP42858 ACTG1P2-201ENST00000415776 1125 ntBASIC17.84■□□□□ 0.45
HTTP42858 ACTG1P11-201ENST00000425411 1125 ntBASIC17.84■□□□□ 0.45
HTTP42858 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.84■□□□□ 0.45
HTTP42858 IQSEC3P1-201ENST00000538799 536 ntBASIC17.84■□□□□ 0.45
HTTP42858 HLA-C-210ENST00000640219 976 ntBASIC17.84■□□□□ 0.45
HTTP42858 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.84■□□□□ 0.45
HTTP42858 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HTTP42858 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.83■□□□□ 0.45
HTTP42858 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.83■□□□□ 0.45
HTTP42858 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.83■□□□□ 0.45
HTTP42858 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HTTP42858 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HTTP42858 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
HTTP42858 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HTTP42858 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.83■□□□□ 0.44
HTTP42858 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HTTP42858 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HTTP42858 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HTTP42858 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HTTP42858 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.83■□□□□ 0.44
HTTP42858 AC004987.2-201ENST00000395959 1148 ntBASIC17.83■□□□□ 0.44
HTTP42858 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HTTP42858 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HTTP42858 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.83■□□□□ 0.44
HTTP42858 AC024681.1-201ENST00000521917 487 ntBASIC17.83■□□□□ 0.44
HTTP42858 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HTTP42858 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HTTP42858 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.83■□□□□ 0.44
HTTP42858 MIR4750-201ENST00000584564 56 ntBASIC17.83■□□□□ 0.44
HTTP42858 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.83■□□□□ 0.44
HTTP42858 AC092171.3-201ENST00000610122 2651 ntBASIC17.83■□□□□ 0.44
HTTP42858 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HTTP42858 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.83■□□□□ 0.44
HTTP42858 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HTTP42858 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HTTP42858 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HTTP42858 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms