Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.07■□□□□ 0.32
GRIK1P39086 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GRIK1P39086 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.07■□□□□ 0.32
GRIK1P39086 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GRIK1P39086 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GRIK1P39086 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
GRIK1P39086 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GRIK1P39086 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 AC124067.4-201ENST00000519691 2379 ntBASIC17.06■□□□□ 0.32
GRIK1P39086 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 AC236430.1-201ENST00000402231 743 ntBASIC17.06■□□□□ 0.32
GRIK1P39086 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.06■□□□□ 0.32
GRIK1P39086 AL080243.2-201ENST00000418783 582 ntBASIC17.06■□□□□ 0.32
GRIK1P39086 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.06■□□□□ 0.32
GRIK1P39086 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.06■□□□□ 0.32
GRIK1P39086 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.06■□□□□ 0.32
GRIK1P39086 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.06■□□□□ 0.32
GRIK1P39086 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.06■□□□□ 0.32
GRIK1P39086 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GRIK1P39086 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.06■□□□□ 0.32
GRIK1P39086 AC022144.1-201ENST00000602255 1580 ntBASIC17.06■□□□□ 0.32
GRIK1P39086 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.06■□□□□ 0.32
GRIK1P39086 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GRIK1P39086 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.05■□□□□ 0.32
GRIK1P39086 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.05■□□□□ 0.32
GRIK1P39086 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.05■□□□□ 0.32
GRIK1P39086 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 AC084018.2-201ENST00000613093 2607 ntBASIC17.05■□□□□ 0.32
GRIK1P39086 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.05■□□□□ 0.32
GRIK1P39086 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.05■□□□□ 0.32
GRIK1P39086 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.05■□□□□ 0.32
GRIK1P39086 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.05■□□□□ 0.32
GRIK1P39086 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.05■□□□□ 0.32
GRIK1P39086 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
GRIK1P39086 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.05■□□□□ 0.32
GRIK1P39086 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.05■□□□□ 0.32
GRIK1P39086 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.05■□□□□ 0.32
GRIK1P39086 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
GRIK1P39086 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.05■□□□□ 0.32
GRIK1P39086 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.05■□□□□ 0.32
GRIK1P39086 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.05■□□□□ 0.32
GRIK1P39086 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GRIK1P39086 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.05■□□□□ 0.32
GRIK1P39086 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
GRIK1P39086 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.05■□□□□ 0.32
GRIK1P39086 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GRIK1P39086 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
GRIK1P39086 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms