Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHRNA3P32297 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHRNA3P32297 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHRNA3P32297 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CHRNA3P32297 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.15■□□□□ 0.34
CHRNA3P32297 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRNA3P32297 MKNK2P1-201ENST00000437526 628 ntBASIC17.15■□□□□ 0.34
CHRNA3P32297 AC004967.1-201ENST00000453589 447 ntBASIC17.15■□□□□ 0.34
CHRNA3P32297 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.15■□□□□ 0.34
CHRNA3P32297 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRNA3P32297 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.15■□□□□ 0.34
CHRNA3P32297 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CHRNA3P32297 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.15■□□□□ 0.34
CHRNA3P32297 AC134684.3-201ENST00000641758 218 ntBASIC17.15■□□□□ 0.34
CHRNA3P32297 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.15■□□□□ 0.34
CHRNA3P32297 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.15■□□□□ 0.34
CHRNA3P32297 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRNA3P32297 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHRNA3P32297 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHRNA3P32297 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA3P32297 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRNA3P32297 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHRNA3P32297 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHRNA3P32297 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CHRNA3P32297 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CHRNA3P32297 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHRNA3P32297 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.14■□□□□ 0.33
CHRNA3P32297 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA3P32297 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 AC211486.1-202ENST00000416371 468 ntBASIC17.14■□□□□ 0.33
CHRNA3P32297 HCG4-201ENST00000418983 998 ntBASIC17.14■□□□□ 0.33
CHRNA3P32297 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.14■□□□□ 0.33
CHRNA3P32297 RPS8P6-201ENST00000426177 609 ntBASIC17.14■□□□□ 0.33
CHRNA3P32297 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 AC211476.1-201ENST00000503899 468 ntBASIC17.14■□□□□ 0.33
CHRNA3P32297 YBX1P5-201ENST00000509441 847 ntBASIC17.14■□□□□ 0.33
CHRNA3P32297 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHRNA3P32297 AC005412.3-201ENST00000580309 715 ntBASIC17.14■□□□□ 0.33
CHRNA3P32297 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA3P32297 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNA3P32297 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA3P32297 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA3P32297 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNA3P32297 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNA3P32297 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHRNA3P32297 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNA3P32297 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA3P32297 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHRNA3P32297 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNA3P32297 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHRNA3P32297 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms