Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC8P31273 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC8P31273 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC8P31273 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC8P31273 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HOXC8P31273 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC8P31273 SOCS2P1-201ENST00000417727 557 ntBASIC17.45■□□□□ 0.38
HOXC8P31273 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HOXC8P31273 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC8P31273 AC092658.1-201ENST00000505836 891 ntBASIC17.45■□□□□ 0.38
HOXC8P31273 TDH-203ENST00000531764 1110 ntBASIC17.45■□□□□ 0.38
HOXC8P31273 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.45■□□□□ 0.38
HOXC8P31273 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC8P31273 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC8P31273 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.45■□□□□ 0.38
HOXC8P31273 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC8P31273 AL022328.1-201ENST00000610050 478 ntBASIC17.45■□□□□ 0.38
HOXC8P31273 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC8P31273 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC8P31273 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC8P31273 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC8P31273 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HOXC8P31273 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HOXC8P31273 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC8P31273 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC8P31273 AC080080.1-201ENST00000625121 2420 ntBASIC17.45■□□□□ 0.38
HOXC8P31273 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC8P31273 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC8P31273 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC8P31273 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC8P31273 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC8P31273 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC8P31273 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HOXC8P31273 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXC8P31273 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 AC092933.1-201ENST00000393644 945 ntBASIC17.44■□□□□ 0.38
HOXC8P31273 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXC8P31273 AC068587.3-201ENST00000526613 355 ntBASIC17.44■□□□□ 0.38
HOXC8P31273 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC8P31273 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC8P31273 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC8P31273 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HOXC8P31273 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC8P31273 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HOXC8P31273 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HOXC8P31273 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
HOXC8P31273 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC8P31273 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC8P31273 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC8P31273 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HOXC8P31273 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXC8P31273 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC8P31273 AL121723.1-201ENST00000445194 1519 ntBASIC17.43■□□□□ 0.38
HOXC8P31273 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HOXC8P31273 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC8P31273 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.43■□□□□ 0.38
HOXC8P31273 VDAC1P7-201ENST00000462417 847 ntBASIC17.43■□□□□ 0.38
HOXC8P31273 AP000812.2-201ENST00000538934 718 ntBASIC17.43■□□□□ 0.38
HOXC8P31273 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXC8P31273 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXC8P31273 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.43■□□□□ 0.38
HOXC8P31273 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC8P31273 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms