Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC144831.1-201ENST00000573312 2656 ntBASIC16.04■□□□□ 0.16
VARSP26640 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.04■□□□□ 0.16
VARSP26640 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VARSP26640 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VARSP26640 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 AC025580.3-201ENST00000617932 1424 ntBASIC16.03■□□□□ 0.16
VARSP26640 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.03■□□□□ 0.16
VARSP26640 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VARSP26640 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VARSP26640 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 RNU1-129P-201ENST00000384064 167 ntBASIC16.03■□□□□ 0.16
VARSP26640 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.03■□□□□ 0.16
VARSP26640 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.03■□□□□ 0.16
VARSP26640 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.03■□□□□ 0.16
VARSP26640 AP002472.1-201ENST00000577490 586 ntBASIC16.03■□□□□ 0.16
VARSP26640 U1.21-201ENST00000580816 167 ntBASIC16.03■□□□□ 0.16
VARSP26640 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
VARSP26640 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.03■□□□□ 0.16
VARSP26640 AC007064.4-201ENST00000637740 555 ntBASIC16.03■□□□□ 0.16
VARSP26640 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.03■□□□□ 0.16
VARSP26640 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.03■□□□□ 0.16
VARSP26640 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
VARSP26640 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
VARSP26640 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.03■□□□□ 0.16
VARSP26640 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.03■□□□□ 0.16
VARSP26640 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARSP26640 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.02■□□□□ 0.16
VARSP26640 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.02■□□□□ 0.16
VARSP26640 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.02■□□□□ 0.16
VARSP26640 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.02■□□□□ 0.16
VARSP26640 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.02■□□□□ 0.16
VARSP26640 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.02■□□□□ 0.16
VARSP26640 CNN2P11-201ENST00000429351 262 ntBASIC16.02■□□□□ 0.16
VARSP26640 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
VARSP26640 AC090142.2-201ENST00000483263 416 ntBASIC16.02■□□□□ 0.16
VARSP26640 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.02■□□□□ 0.16
VARSP26640 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.02■□□□□ 0.16
VARSP26640 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.02■□□□□ 0.16
VARSP26640 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
VARSP26640 KRT19P2-202ENST00000557173 1012 ntBASIC16.02■□□□□ 0.16
VARSP26640 MIR4469-201ENST00000583919 79 ntBASIC16.02■□□□□ 0.16
VARSP26640 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 AL031055.1-201ENST00000606362 631 ntBASIC16.02■□□□□ 0.16
VARSP26640 AL513190.1-201ENST00000621254 727 ntBASIC16.02■□□□□ 0.16
VARSP26640 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARSP26640 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.02■□□□□ 0.16
VARSP26640 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.02■□□□□ 0.15
VARSP26640 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.02■□□□□ 0.15
VARSP26640 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARSP26640 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.02■□□□□ 0.15
VARSP26640 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.02■□□□□ 0.15
VARSP26640 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
VARSP26640 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.02■□□□□ 0.15
VARSP26640 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms