Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN3P26045 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN3P26045 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PTPN3P26045 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN3P26045 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN3P26045 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 AP005117.1-202ENST00000581724 1908 ntBASIC16.55■□□□□ 0.24
PTPN3P26045 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN3P26045 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN3P26045 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN3P26045 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN3P26045 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN3P26045 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN3P26045 DNAJB3-201ENST00000446806 729 ntBASIC16.54■□□□□ 0.24
PTPN3P26045 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN3P26045 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN3P26045 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN3P26045 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN3P26045 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN3P26045 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN3P26045 AC005829.1-201ENST00000570002 483 ntBASIC16.54■□□□□ 0.24
PTPN3P26045 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN3P26045 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN3P26045 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTPN3P26045 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN3P26045 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PTPN3P26045 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 CEND1P1-201ENST00000451006 455 ntBASIC16.53■□□□□ 0.24
PTPN3P26045 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN3P26045 AC069335.1-201ENST00000489972 472 ntBASIC16.53■□□□□ 0.24
PTPN3P26045 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.53■□□□□ 0.24
PTPN3P26045 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 IGHV3-62-201ENST00000520057 340 ntBASIC16.53■□□□□ 0.24
PTPN3P26045 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN3P26045 KRT8P23-201ENST00000560090 1207 ntBASIC16.53■□□□□ 0.24
PTPN3P26045 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN3P26045 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN3P26045 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PTPN3P26045 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms