Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.71□□□□□ -0.22
COL8A2P25067 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL8A2P25067 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
COL8A2P25067 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL8A2P25067 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
COL8A2P25067 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL8A2P25067 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.71□□□□□ -0.22
COL8A2P25067 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL8A2P25067 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
COL8A2P25067 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.71□□□□□ -0.22
COL8A2P25067 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.71□□□□□ -0.22
COL8A2P25067 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
COL8A2P25067 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
COL8A2P25067 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 AL035633.1-201ENST00000406139 838 ntBASIC13.7□□□□□ -0.22
COL8A2P25067 MRPS18AP1-201ENST00000414458 589 ntBASIC13.7□□□□□ -0.22
COL8A2P25067 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.7□□□□□ -0.22
COL8A2P25067 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.7□□□□□ -0.22
COL8A2P25067 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
COL8A2P25067 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.7□□□□□ -0.22
COL8A2P25067 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.7□□□□□ -0.22
COL8A2P25067 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.7□□□□□ -0.22
COL8A2P25067 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 LINC02560-201ENST00000596379 459 ntBASIC13.7□□□□□ -0.22
COL8A2P25067 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.7□□□□□ -0.22
COL8A2P25067 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.7□□□□□ -0.22
COL8A2P25067 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.7□□□□□ -0.22
COL8A2P25067 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL8A2P25067 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
COL8A2P25067 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.69□□□□□ -0.22
COL8A2P25067 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.69□□□□□ -0.22
COL8A2P25067 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.69□□□□□ -0.22
COL8A2P25067 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
COL8A2P25067 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 AL162727.3-201ENST00000635661 2787 ntBASIC13.69□□□□□ -0.22
COL8A2P25067 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL8A2P25067 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.69□□□□□ -0.22
COL8A2P25067 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms