Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CAPN3P20807 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN3P20807 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CAPN3P20807 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN3P20807 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN3P20807 SSR4P1-203ENST00000599569 2260 ntBASIC15.68■□□□□ 0.1
CAPN3P20807 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CAPN3P20807 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.67■□□□□ 0.1
CAPN3P20807 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CAPN3P20807 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CAPN3P20807 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 AC002347.1-201ENST00000569543 541 ntBASIC15.67■□□□□ 0.1
CAPN3P20807 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 MTDHP5-201ENST00000598980 586 ntBASIC15.67■□□□□ 0.1
CAPN3P20807 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CAPN3P20807 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CAPN3P20807 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CAPN3P20807 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPN3P20807 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CAPN3P20807 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 AC008677.1-201ENST00000519230 1561 ntBASIC15.66■□□□□ 0.1
CAPN3P20807 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 AC136621.1-201ENST00000624017 2304 ntBASIC15.66■□□□□ 0.1
CAPN3P20807 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.66■□□□□ 0.1
CAPN3P20807 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.66■□□□□ 0.1
CAPN3P20807 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.66■□□□□ 0.1
CAPN3P20807 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.66■□□□□ 0.1
CAPN3P20807 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 RPS15P9-201ENST00000494093 319 ntBASIC15.66■□□□□ 0.1
CAPN3P20807 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.66■□□□□ 0.1
CAPN3P20807 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.66■□□□□ 0.1
CAPN3P20807 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.66■□□□□ 0.1
CAPN3P20807 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 AC129492.6-201ENST00000611383 1305 ntBASIC15.66■□□□□ 0.1
CAPN3P20807 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
CAPN3P20807 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.66■□□□□ 0.1
CAPN3P20807 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.66■□□□□ 0.1
CAPN3P20807 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CAPN3P20807 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CAPN3P20807 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CAPN3P20807 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms