Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 SNX33P1-201ENST00000592116 1762 ntBASIC16.38■□□□□ 0.21
VCLP18206 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.38■□□□□ 0.21
VCLP18206 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.38■□□□□ 0.21
VCLP18206 KRT8P39-201ENST00000396270 1433 ntBASIC16.38■□□□□ 0.21
VCLP18206 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VCLP18206 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
VCLP18206 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
VCLP18206 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 AL355306.1-201ENST00000415580 579 ntBASIC16.38■□□□□ 0.21
VCLP18206 AC254562.1-201ENST00000417586 456 ntBASIC16.38■□□□□ 0.21
VCLP18206 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.38■□□□□ 0.21
VCLP18206 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 SPDYE11-202ENST00000450699 704 ntBASIC16.38■□□□□ 0.21
VCLP18206 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.38■□□□□ 0.21
VCLP18206 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.38■□□□□ 0.21
VCLP18206 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.38■□□□□ 0.21
VCLP18206 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.38■□□□□ 0.21
VCLP18206 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.38■□□□□ 0.21
VCLP18206 SPDYE9P-201ENST00000570642 692 ntBASIC16.38■□□□□ 0.21
VCLP18206 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 SPDYE10P-202ENST00000612005 668 ntBASIC16.38■□□□□ 0.21
VCLP18206 SPDYE8P-202ENST00000612377 668 ntBASIC16.38■□□□□ 0.21
VCLP18206 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
VCLP18206 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.38■□□□□ 0.21
VCLP18206 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.38■□□□□ 0.21
VCLP18206 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
VCLP18206 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VCLP18206 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 WASH6P-202ENST00000359512 1437 ntBASIC16.37■□□□□ 0.21
VCLP18206 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
VCLP18206 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.37■□□□□ 0.21
VCLP18206 ALOX12P2-203ENST00000570921 1945 ntBASIC16.37■□□□□ 0.21
VCLP18206 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VCLP18206 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
VCLP18206 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.37■□□□□ 0.21
VCLP18206 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.37■□□□□ 0.21
VCLP18206 AP000344.2-201ENST00000512987 629 ntBASIC16.37■□□□□ 0.21
VCLP18206 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VCLP18206 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.37■□□□□ 0.21
VCLP18206 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
VCLP18206 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.37■□□□□ 0.21
VCLP18206 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.37■□□□□ 0.21
VCLP18206 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 AC026120.1-201ENST00000611536 926 ntBASIC16.37■□□□□ 0.21
VCLP18206 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.37■□□□□ 0.21
VCLP18206 AC055717.3-201ENST00000622967 595 ntBASIC16.37■□□□□ 0.21
VCLP18206 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.37■□□□□ 0.21
VCLP18206 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
VCLP18206 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VCLP18206 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VCLP18206 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCLP18206 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VCLP18206 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.36■□□□□ 0.21
VCLP18206 AL671710.1-201ENST00000610245 2349 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms