Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFRAP16234 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFRAP16234 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFRAP16234 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.05■□□□□ 0.32
PDGFRAP16234 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFRAP16234 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PDGFRAP16234 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFRAP16234 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PDGFRAP16234 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFRAP16234 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFRAP16234 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PDGFRAP16234 AC008894.3-201ENST00000624324 3103 ntBASIC17.05■□□□□ 0.32
PDGFRAP16234 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFRAP16234 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.05■□□□□ 0.32
PDGFRAP16234 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFRAP16234 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PDGFRAP16234 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.05■□□□□ 0.32
PDGFRAP16234 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDGFRAP16234 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.04■□□□□ 0.32
PDGFRAP16234 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 KRT18P28-201ENST00000453838 1332 ntBASIC17.04■□□□□ 0.32
PDGFRAP16234 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 AC010491.1-201ENST00000563101 2797 ntBASIC17.04■□□□□ 0.32
PDGFRAP16234 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 AC142381.1-201ENST00000426099 345 ntBASIC17.04■□□□□ 0.32
PDGFRAP16234 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 AC005237.2-201ENST00000434368 219 ntBASIC17.04■□□□□ 0.32
PDGFRAP16234 METTL21AP1-201ENST00000438852 635 ntBASIC17.04■□□□□ 0.32
PDGFRAP16234 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.04■□□□□ 0.32
PDGFRAP16234 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.04■□□□□ 0.32
PDGFRAP16234 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.04■□□□□ 0.32
PDGFRAP16234 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDGFRAP16234 UXT-AS1-201ENST00000590504 1525 ntBASIC17.04■□□□□ 0.32
PDGFRAP16234 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDGFRAP16234 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PDGFRAP16234 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDGFRAP16234 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.04■□□□□ 0.32
PDGFRAP16234 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDGFRAP16234 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.03■□□□□ 0.32
PDGFRAP16234 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFRAP16234 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFRAP16234 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PDGFRAP16234 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFRAP16234 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFRAP16234 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFRAP16234 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFRAP16234 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.03■□□□□ 0.32
PDGFRAP16234 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFRAP16234 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.03■□□□□ 0.32
PDGFRAP16234 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.03■□□□□ 0.32
PDGFRAP16234 MIR4321-201ENST00000592276 80 ntBASIC17.03■□□□□ 0.32
PDGFRAP16234 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
PDGFRAP16234 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDGFRAP16234 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.02■□□□□ 0.32
PDGFRAP16234 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms