Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CFTRP13569 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CFTRP13569 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CFTRP13569 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CFTRP13569 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CFTRP13569 AC126915.1-201ENST00000522847 1038 ntBASIC27.14■■□□□ 1.94
CFTRP13569 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
CFTRP13569 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
CFTRP13569 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC27.14■■□□□ 1.94
CFTRP13569 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
CFTRP13569 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC27.14■■□□□ 1.94
CFTRP13569 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CFTRP13569 AC078925.2-201ENST00000624013 1973 ntBASIC27.14■■□□□ 1.93
CFTRP13569 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CFTRP13569 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC27.13■■□□□ 1.93
CFTRP13569 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
CFTRP13569 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFTRP13569 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC27.13■■□□□ 1.93
CFTRP13569 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFTRP13569 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
CFTRP13569 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC27.13■■□□□ 1.93
CFTRP13569 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CFTRP13569 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CFTRP13569 LDHBP1-201ENST00000455730 1119 ntBASIC27.13■■□□□ 1.93
CFTRP13569 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC27.13■■□□□ 1.93
CFTRP13569 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CFTRP13569 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC27.13■■□□□ 1.93
CFTRP13569 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC27.13■■□□□ 1.93
CFTRP13569 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC27.13■■□□□ 1.93
CFTRP13569 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC27.13■■□□□ 1.93
CFTRP13569 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC27.13■■□□□ 1.93
CFTRP13569 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFTRP13569 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CFTRP13569 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CFTRP13569 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CFTRP13569 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
CFTRP13569 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC27.13■■□□□ 1.93
CFTRP13569 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC27.12■■□□□ 1.93
CFTRP13569 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC27.12■■□□□ 1.93
CFTRP13569 TK1-203ENST00000588734 1681 ntTSL 2 BASIC27.12■■□□□ 1.93
CFTRP13569 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC27.12■■□□□ 1.93
CFTRP13569 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
CFTRP13569 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
CFTRP13569 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC27.12■■□□□ 1.93
CFTRP13569 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CFTRP13569 SDHD-202ENST00000525291 790 ntTSL 3 BASIC27.12■■□□□ 1.93
CFTRP13569 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC27.12■■□□□ 1.93
CFTRP13569 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC27.12■■□□□ 1.93
CFTRP13569 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC27.12■■□□□ 1.93
CFTRP13569 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CFTRP13569 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CFTRP13569 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CFTRP13569 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CFTRP13569 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC27.11■■□□□ 1.93
CFTRP13569 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CFTRP13569 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC27.11■■□□□ 1.93
CFTRP13569 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC27.11■■□□□ 1.93
CFTRP13569 MPV17-204ENST00000399052 749 ntTSL 4 BASIC27.11■■□□□ 1.93
CFTRP13569 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC27.11■■□□□ 1.93
CFTRP13569 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CFTRP13569 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CFTRP13569 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC27.11■■□□□ 1.93
CFTRP13569 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC27.11■■□□□ 1.93
CFTRP13569 RN7SL48P-201ENST00000579283 293 ntBASIC27.11■■□□□ 1.93
CFTRP13569 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC27.11■■□□□ 1.93
CFTRP13569 KLK11-210ENST00000600362 759 ntTSL 3 BASIC27.11■■□□□ 1.93
CFTRP13569 U62317.3-201ENST00000608319 855 ntBASIC27.11■■□□□ 1.93
CFTRP13569 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CFTRP13569 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC27.1■■□□□ 1.93
CFTRP13569 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
CFTRP13569 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CFTRP13569 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFTRP13569 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC27.1■■□□□ 1.93
CFTRP13569 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CFTRP13569 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFTRP13569 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CFTRP13569 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC27.1■■□□□ 1.93
CFTRP13569 AC092978.1-202ENST00000637590 1327 ntBASIC27.1■■□□□ 1.93
CFTRP13569 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC27.1■■□□□ 1.93
CFTRP13569 AC018635.2-201ENST00000608625 364 ntBASIC27.1■■□□□ 1.93
CFTRP13569 AP001505.2-201ENST00000616815 443 ntBASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms