Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.18□□□□□ -0.14
CCL2P13500 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL2P13500 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL2P13500 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL2P13500 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.18□□□□□ -0.14
CCL2P13500 KRT8P23-201ENST00000560090 1207 ntBASIC14.18□□□□□ -0.14
CCL2P13500 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL2P13500 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.18□□□□□ -0.14
CCL2P13500 AC073389.1-201ENST00000595595 795 ntBASIC14.18□□□□□ -0.14
CCL2P13500 AC027612.4-201ENST00000605371 583 ntBASIC14.18□□□□□ -0.14
CCL2P13500 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL2P13500 AC079781.4-201ENST00000641908 219 ntBASIC14.18□□□□□ -0.14
CCL2P13500 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL2P13500 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CCL2P13500 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL2P13500 PCDHA1-201ENST00000378133 2726 ntBASIC14.18□□□□□ -0.14
CCL2P13500 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCL2P13500 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCL2P13500 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL2P13500 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL2P13500 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
CCL2P13500 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL2P13500 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL2P13500 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL2P13500 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 AL592424.1-201ENST00000563624 1536 ntBASIC14.17□□□□□ -0.14
CCL2P13500 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.17□□□□□ -0.14
CCL2P13500 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CCL2P13500 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.17□□□□□ -0.14
CCL2P13500 MIR346-201ENST00000362234 95 ntBASIC14.17□□□□□ -0.14
CCL2P13500 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL2P13500 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL2P13500 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
CCL2P13500 AP001160.2-201ENST00000596071 487 ntBASIC14.17□□□□□ -0.14
CCL2P13500 GPALPP1-207ENST00000611650 899 ntBASIC14.17□□□□□ -0.14
CCL2P13500 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.17□□□□□ -0.14
CCL2P13500 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.17□□□□□ -0.14
CCL2P13500 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.17□□□□□ -0.14
CCL2P13500 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.17□□□□□ -0.14
CCL2P13500 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCL2P13500 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 CYP2T1P-202ENST00000641596 2535 ntBASIC14.16□□□□□ -0.14
CCL2P13500 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
CCL2P13500 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CCL2P13500 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL2P13500 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.16□□□□□ -0.14
CCL2P13500 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL2P13500 RBPMS2P1-201ENST00000437762 623 ntBASIC14.16□□□□□ -0.14
CCL2P13500 AC023141.5-201ENST00000458585 616 ntBASIC14.16□□□□□ -0.14
CCL2P13500 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL2P13500 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL2P13500 RNA5SP410-201ENST00000516285 106 ntBASIC14.16□□□□□ -0.14
CCL2P13500 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL2P13500 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.16□□□□□ -0.14
CCL2P13500 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.16□□□□□ -0.14
CCL2P13500 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCL2P13500 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL2P13500 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms