Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
BMP3P12645 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BMP3P12645 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.62■□□□□ 0.57
BMP3P12645 NKILA-202ENST00000614771 2598 ntBASIC18.62■□□□□ 0.57
BMP3P12645 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BMP3P12645 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BMP3P12645 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
BMP3P12645 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BMP3P12645 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.61■□□□□ 0.57
BMP3P12645 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
BMP3P12645 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.61■□□□□ 0.57
BMP3P12645 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 AC087499.6-201ENST00000411576 835 ntBASIC18.61■□□□□ 0.57
BMP3P12645 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.61■□□□□ 0.57
BMP3P12645 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.61■□□□□ 0.57
BMP3P12645 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BMP3P12645 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.61■□□□□ 0.57
BMP3P12645 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
BMP3P12645 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.61■□□□□ 0.57
BMP3P12645 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.61■□□□□ 0.57
BMP3P12645 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
BMP3P12645 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
BMP3P12645 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BMP3P12645 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
BMP3P12645 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BMP3P12645 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.6■□□□□ 0.57
BMP3P12645 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BMP3P12645 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 PCDHA12-202ENST00000613593 2588 ntBASIC18.6■□□□□ 0.57
BMP3P12645 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP3P12645 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BMP3P12645 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 SLC7A15P-201ENST00000424028 1363 ntBASIC18.6■□□□□ 0.57
BMP3P12645 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
BMP3P12645 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
BMP3P12645 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
BMP3P12645 AZGP1P1-201ENST00000411909 902 ntBASIC18.6■□□□□ 0.57
BMP3P12645 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP3P12645 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP3P12645 TPRX2P-201ENST00000535362 881 ntBASIC18.6■□□□□ 0.57
BMP3P12645 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.6■□□□□ 0.57
BMP3P12645 AC092337.1-201ENST00000568699 1129 ntBASIC18.6■□□□□ 0.57
BMP3P12645 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.6■□□□□ 0.57
BMP3P12645 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.6■□□□□ 0.57
BMP3P12645 CHCHD2P3-201ENST00000603038 451 ntBASIC18.6■□□□□ 0.57
BMP3P12645 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP3P12645 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.6■□□□□ 0.57
BMP3P12645 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP3P12645 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
BMP3P12645 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
BMP3P12645 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.6■□□□□ 0.57
BMP3P12645 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BMP3P12645 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.59■□□□□ 0.57
BMP3P12645 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP3P12645 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
BMP3P12645 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms