Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 AL691432.1-201ENST00000596308 1422 ntBASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 AC004987.2-201ENST00000395959 1148 ntBASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 AL355994.2-201ENST00000447882 704 ntBASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 CSF2RBP1-201ENST00000447905 391 ntBASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.32■■□□□ 1
CSB-PGBD3P0DP91 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 GGT3P-204ENST00000453783 1664 ntBASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSB-PGBD3P0DP91 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 FAM21FP-201ENST00000426241 1131 ntBASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 PTP4A1P2-201ENST00000546033 454 ntBASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 LETM1P2-201ENST00000597330 2178 ntBASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSB-PGBD3P0DP91 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 TUBB1P2-201ENST00000422712 1306 ntBASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 TUBB1P1-201ENST00000503144 1300 ntBASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 KRT8P37-201ENST00000451609 1420 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms