Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.17■□□□□ 0.5
HOXC6P09630 RNA5SP412-201ENST00000516234 123 ntBASIC18.17■□□□□ 0.5
HOXC6P09630 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HOXC6P09630 AL022328.1-201ENST00000610050 478 ntBASIC18.17■□□□□ 0.5
HOXC6P09630 MIR6869-201ENST00000619434 62 ntBASIC18.17■□□□□ 0.5
HOXC6P09630 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HOXC6P09630 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.17■□□□□ 0.5
HOXC6P09630 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HOXC6P09630 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 TUBB1P2-201ENST00000422712 1306 ntBASIC18.17■□□□□ 0.5
HOXC6P09630 TUBB1P1-201ENST00000503144 1300 ntBASIC18.17■□□□□ 0.5
HOXC6P09630 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 RNF216P1-203ENST00000404404 2427 ntBASIC18.16■□□□□ 0.5
HOXC6P09630 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HOXC6P09630 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC6P09630 AZGP1P1-201ENST00000411909 902 ntBASIC18.16■□□□□ 0.5
HOXC6P09630 AC074338.1-201ENST00000416825 156 ntBASIC18.16■□□□□ 0.5
HOXC6P09630 AC245100.5-201ENST00000452108 331 ntBASIC18.16■□□□□ 0.5
HOXC6P09630 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 ENPP7P5-201ENST00000541031 1031 ntBASIC18.16■□□□□ 0.5
HOXC6P09630 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HOXC6P09630 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC6P09630 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC6P09630 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HOXC6P09630 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC6P09630 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC6P09630 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC6P09630 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC6P09630 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 AC078925.2-201ENST00000624013 1973 ntBASIC18.15■□□□□ 0.5
HOXC6P09630 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 AL133338.1-201ENST00000565695 1517 ntBASIC18.15■□□□□ 0.5
HOXC6P09630 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HOXC6P09630 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXC6P09630 FO681548.1-201ENST00000455617 1132 ntBASIC18.15■□□□□ 0.5
HOXC6P09630 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HOXC6P09630 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC6P09630 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXC6P09630 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXC6P09630 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXC6P09630 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXC6P09630 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXC6P09630 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC6P09630 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.15■□□□□ 0.5
HOXC6P09630 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HOXC6P09630 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms