Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CD48P09326 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.81■□□□□ 0.28
CD48P09326 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CD48P09326 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CD48P09326 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.81■□□□□ 0.28
CD48P09326 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 HTR5BP-201ENST00000430851 1154 ntBASIC16.81■□□□□ 0.28
CD48P09326 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.81■□□□□ 0.28
CD48P09326 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.81■□□□□ 0.28
CD48P09326 AC079140.1-201ENST00000508039 487 ntBASIC16.81■□□□□ 0.28
CD48P09326 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.81■□□□□ 0.28
CD48P09326 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.81■□□□□ 0.28
CD48P09326 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.81■□□□□ 0.28
CD48P09326 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CD48P09326 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.81■□□□□ 0.28
CD48P09326 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.81■□□□□ 0.28
CD48P09326 AC026120.1-201ENST00000611536 926 ntBASIC16.81■□□□□ 0.28
CD48P09326 SPTSSB-204ENST00000617024 1292 ntBASIC16.81■□□□□ 0.28
CD48P09326 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CD48P09326 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.81■□□□□ 0.28
CD48P09326 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CD48P09326 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD48P09326 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.8■□□□□ 0.28
CD48P09326 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.8■□□□□ 0.28
CD48P09326 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CD48P09326 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.8■□□□□ 0.28
CD48P09326 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 SPDYE11-202ENST00000450699 704 ntBASIC16.8■□□□□ 0.28
CD48P09326 TIMM8BP1-201ENST00000452384 211 ntBASIC16.8■□□□□ 0.28
CD48P09326 AC098859.1-201ENST00000502915 1238 ntBASIC16.8■□□□□ 0.28
CD48P09326 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.8■□□□□ 0.28
CD48P09326 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.8■□□□□ 0.28
CD48P09326 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 SPDYE9P-201ENST00000570642 692 ntBASIC16.8■□□□□ 0.28
CD48P09326 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.8■□□□□ 0.28
CD48P09326 AC061975.2-201ENST00000581722 295 ntBASIC16.8■□□□□ 0.28
CD48P09326 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.8■□□□□ 0.28
CD48P09326 MTDHP5-201ENST00000598980 586 ntBASIC16.8■□□□□ 0.28
CD48P09326 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.8■□□□□ 0.28
CD48P09326 SPDYE10P-202ENST00000612005 668 ntBASIC16.8■□□□□ 0.28
CD48P09326 SPDYE8P-202ENST00000612377 668 ntBASIC16.8■□□□□ 0.28
CD48P09326 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.8■□□□□ 0.28
CD48P09326 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CD48P09326 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD48P09326 AC134407.2-201ENST00000625089 1978 ntBASIC16.8■□□□□ 0.28
CD48P09326 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.8■□□□□ 0.28
CD48P09326 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CD48P09326 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.79■□□□□ 0.28
CD48P09326 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
CD48P09326 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD48P09326 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms