Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.31■□□□□ 0.2
SRPRAP08240 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SRPRAP08240 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SRPRAP08240 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SRPRAP08240 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.31■□□□□ 0.2
SRPRAP08240 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SRPRAP08240 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SRPRAP08240 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.31■□□□□ 0.2
SRPRAP08240 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.31■□□□□ 0.2
SRPRAP08240 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.31■□□□□ 0.2
SRPRAP08240 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.31■□□□□ 0.2
SRPRAP08240 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SRPRAP08240 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.31■□□□□ 0.2
SRPRAP08240 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
SRPRAP08240 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.31■□□□□ 0.2
SRPRAP08240 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 AC124067.4-201ENST00000519691 2379 ntBASIC16.31■□□□□ 0.2
SRPRAP08240 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SRPRAP08240 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.31■□□□□ 0.2
SRPRAP08240 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRPRAP08240 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.31■□□□□ 0.2
SRPRAP08240 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 AC005052.1-201ENST00000625181 2492 ntBASIC16.3■□□□□ 0.2
SRPRAP08240 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.3■□□□□ 0.2
SRPRAP08240 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.3■□□□□ 0.2
SRPRAP08240 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.3■□□□□ 0.2
SRPRAP08240 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.3■□□□□ 0.2
SRPRAP08240 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.3■□□□□ 0.2
SRPRAP08240 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SRPRAP08240 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.3■□□□□ 0.2
SRPRAP08240 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 AL353779.1-201ENST00000434793 351 ntBASIC16.3■□□□□ 0.2
SRPRAP08240 HIST3H2BA-201ENST00000436555 524 ntBASIC16.3■□□□□ 0.2
SRPRAP08240 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.3■□□□□ 0.2
SRPRAP08240 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SRPRAP08240 AC104794.3-201ENST00000566840 1248 ntBASIC16.3■□□□□ 0.2
SRPRAP08240 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.3■□□□□ 0.2
SRPRAP08240 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.3■□□□□ 0.2
SRPRAP08240 AL662799.1-202ENST00000614205 422 ntBASIC16.3■□□□□ 0.2
SRPRAP08240 AL358472.5-202ENST00000641448 1267 ntBASIC16.3■□□□□ 0.2
SRPRAP08240 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SRPRAP08240 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.3■□□□□ 0.2
SRPRAP08240 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SRPRAP08240 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.3■□□□□ 0.2
SRPRAP08240 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRPRAP08240 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.29■□□□□ 0.2
SRPRAP08240 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.29■□□□□ 0.2
SRPRAP08240 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SRPRAP08240 KRT8P37-201ENST00000451609 1420 ntBASIC16.29■□□□□ 0.2
SRPRAP08240 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.29■□□□□ 0.2
SRPRAP08240 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.29■□□□□ 0.2
SRPRAP08240 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.29■□□□□ 0.2
SRPRAP08240 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.29■□□□□ 0.2
SRPRAP08240 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SRPRAP08240 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.29■□□□□ 0.2
SRPRAP08240 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.29■□□□□ 0.2
SRPRAP08240 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SRPRAP08240 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.29■□□□□ 0.2
SRPRAP08240 DOC2GP-202ENST00000514950 1163 ntBASIC16.29■□□□□ 0.2
SRPRAP08240 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
SRPRAP08240 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.29■□□□□ 0.2
SRPRAP08240 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.29■□□□□ 0.2
SRPRAP08240 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.29■□□□□ 0.2
SRPRAP08240 AL109936.8-201ENST00000641772 604 ntBASIC16.29■□□□□ 0.2
SRPRAP08240 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
SRPRAP08240 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRPRAP08240 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms