Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC243591.1-201ENST00000452967 1364 ntBASIC18.56■□□□□ 0.56
TPM2P07951 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TPM2P07951 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TPM2P07951 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.56■□□□□ 0.56
TPM2P07951 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TPM2P07951 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.56■□□□□ 0.56
TPM2P07951 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 KRT16P4-201ENST00000453883 522 ntBASIC18.56■□□□□ 0.56
TPM2P07951 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 DUX4L17-201ENST00000557360 1267 ntBASIC18.56■□□□□ 0.56
TPM2P07951 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.56■□□□□ 0.56
TPM2P07951 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TPM2P07951 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TPM2P07951 NCF1C-201ENST00000438382 1427 ntBASIC18.56■□□□□ 0.56
TPM2P07951 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPM2P07951 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TPM2P07951 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM2P07951 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM2P07951 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
TPM2P07951 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 LINC01101-201ENST00000622953 1884 ntBASIC18.55■□□□□ 0.56
TPM2P07951 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.55■□□□□ 0.56
TPM2P07951 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM2P07951 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.55■□□□□ 0.56
TPM2P07951 MIR3180-1-201ENST00000580374 94 ntBASIC18.55■□□□□ 0.56
TPM2P07951 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 MIR3180-3-201ENST00000584616 94 ntBASIC18.55■□□□□ 0.56
TPM2P07951 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.55■□□□□ 0.56
TPM2P07951 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.55■□□□□ 0.56
TPM2P07951 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM2P07951 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.55■□□□□ 0.56
TPM2P07951 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TPM2P07951 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TPM2P07951 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TPM2P07951 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPM2P07951 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.54■□□□□ 0.56
TPM2P07951 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TPM2P07951 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPM2P07951 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms